Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCMT2O60294 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCMT2O60294 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LCMT2O60294 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCMT2O60294 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCMT2O60294 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LCMT2O60294 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LCMT2O60294 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCMT2O60294 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LCMT2O60294 OR2I1P-207ENST00000453522 948 ntBASIC21.06■□□□□ 0.96
LCMT2O60294 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LCMT2O60294 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LCMT2O60294 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCMT2O60294 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.06■□□□□ 0.96
LCMT2O60294 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.05■□□□□ 0.96
LCMT2O60294 SLC47A1P1-202ENST00000449666 945 ntBASIC21.05■□□□□ 0.96
LCMT2O60294 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.05■□□□□ 0.96
LCMT2O60294 AL031432.3-201ENST00000607698 485 ntBASIC21.05■□□□□ 0.96
LCMT2O60294 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.05■□□□□ 0.96
LCMT2O60294 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.05■□□□□ 0.96
LCMT2O60294 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
LCMT2O60294 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCMT2O60294 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCMT2O60294 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCMT2O60294 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCMT2O60294 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
LCMT2O60294 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LCMT2O60294 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
LCMT2O60294 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCMT2O60294 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCMT2O60294 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCMT2O60294 AC087742.1-201ENST00000575880 1738 ntBASIC21.04■□□□□ 0.96
LCMT2O60294 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCMT2O60294 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCMT2O60294 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCMT2O60294 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCMT2O60294 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LCMT2O60294 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.03■□□□□ 0.96
LCMT2O60294 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LCMT2O60294 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCMT2O60294 LINC01960-201ENST00000563759 1884 ntBASIC21.03■□□□□ 0.96
LCMT2O60294 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.03■□□□□ 0.96
LCMT2O60294 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LCMT2O60294 EDA-201ENST00000338901 1233 ntBASIC21.02■□□□□ 0.96
LCMT2O60294 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.02■□□□□ 0.96
LCMT2O60294 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 AC133561.4-201ENST00000566112 224 ntBASIC21.02■□□□□ 0.96
LCMT2O60294 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCMT2O60294 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LCMT2O60294 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCMT2O60294 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCMT2O60294 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCMT2O60294 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCMT2O60294 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCMT2O60294 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCMT2O60294 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.01■□□□□ 0.95
LCMT2O60294 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.01■□□□□ 0.95
LCMT2O60294 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LCMT2O60294 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCMT2O60294 BX842568.3-201ENST00000418104 571 ntBASIC21.01■□□□□ 0.95
LCMT2O60294 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.01■□□□□ 0.95
LCMT2O60294 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.01■□□□□ 0.95
LCMT2O60294 AL355001.2-201ENST00000620617 1191 ntBASIC21.01■□□□□ 0.95
LCMT2O60294 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LCMT2O60294 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LCMT2O60294 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.01■□□□□ 0.95
LCMT2O60294 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LCMT2O60294 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LCMT2O60294 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LCMT2O60294 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCMT2O60294 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCMT2O60294 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21■□□□□ 0.95
LCMT2O60294 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCMT2O60294 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LCMT2O60294 MIR638-201ENST00000385237 100 ntBASIC21■□□□□ 0.95
LCMT2O60294 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21■□□□□ 0.95
LCMT2O60294 SUDS3P1-201ENST00000505831 966 ntBASIC21■□□□□ 0.95
LCMT2O60294 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LCMT2O60294 AC008764.7-201ENST00000593779 1081 ntBASIC21■□□□□ 0.95
LCMT2O60294 AL031602.1-201ENST00000633169 911 ntBASIC21■□□□□ 0.95
LCMT2O60294 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LCMT2O60294 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21■□□□□ 0.95
LCMT2O60294 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCMT2O60294 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
LCMT2O60294 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms