Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6DO43924 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6DO43924 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6DO43924 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6DO43924 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6DO43924 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6DO43924 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6DO43924 AC092296.2-201ENST00000589470 999 ntBASIC17.03■□□□□ 0.32
PDE6DO43924 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDE6DO43924 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6DO43924 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PDE6DO43924 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.02■□□□□ 0.32
PDE6DO43924 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.02■□□□□ 0.32
PDE6DO43924 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PDE6DO43924 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.02■□□□□ 0.32
PDE6DO43924 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6DO43924 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6DO43924 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6DO43924 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6DO43924 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6DO43924 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
PDE6DO43924 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.01■□□□□ 0.31
PDE6DO43924 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PDE6DO43924 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6DO43924 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 ECEL1P2-201ENST00000461596 1295 ntBASIC17.01■□□□□ 0.31
PDE6DO43924 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6DO43924 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6DO43924 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PDE6DO43924 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6DO43924 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6DO43924 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PDE6DO43924 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDE6DO43924 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6DO43924 AL592295.1-201ENST00000400984 884 ntBASIC17■□□□□ 0.31
PDE6DO43924 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17■□□□□ 0.31
PDE6DO43924 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6DO43924 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6DO43924 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDE6DO43924 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6DO43924 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PDE6DO43924 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PDE6DO43924 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17■□□□□ 0.31
PDE6DO43924 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6DO43924 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6DO43924 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PDE6DO43924 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6DO43924 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6DO43924 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6DO43924 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6DO43924 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6DO43924 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.99■□□□□ 0.31
PDE6DO43924 AC131274.2-201ENST00000580697 1507 ntBASIC16.99■□□□□ 0.31
PDE6DO43924 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6DO43924 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6DO43924 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6DO43924 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6DO43924 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6DO43924 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6DO43924 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6DO43924 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDE6DO43924 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6DO43924 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PDE6DO43924 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDE6DO43924 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6DO43924 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6DO43924 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PDE6DO43924 AC026202.3-201ENST00000600805 1127 ntBASIC16.98■□□□□ 0.31
PDE6DO43924 RAP2CP1-202ENST00000605179 643 ntBASIC16.98■□□□□ 0.31
PDE6DO43924 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6DO43924 CR559946.2-201ENST00000623684 991 ntBASIC16.98■□□□□ 0.31
PDE6DO43924 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDE6DO43924 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6DO43924 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6DO43924 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDE6DO43924 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6DO43924 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6DO43924 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms