Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.71■□□□□ 0.59
SSNA1O43805 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.71■□□□□ 0.59
SSNA1O43805 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.71■□□□□ 0.59
SSNA1O43805 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSNA1O43805 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.71■□□□□ 0.59
SSNA1O43805 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSNA1O43805 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SSNA1O43805 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSNA1O43805 AC010542.4-201ENST00000563151 1910 ntBASIC18.7■□□□□ 0.58
SSNA1O43805 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
SSNA1O43805 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SSNA1O43805 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SSNA1O43805 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 DUX4L29-201ENST00000425409 679 ntBASIC18.7■□□□□ 0.58
SSNA1O43805 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.7■□□□□ 0.58
SSNA1O43805 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.7■□□□□ 0.58
SSNA1O43805 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SSNA1O43805 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SSNA1O43805 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSNA1O43805 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SSNA1O43805 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SSNA1O43805 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 LINC01521-201ENST00000504184 1943 ntBASIC18.69■□□□□ 0.58
SSNA1O43805 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 HLA-V-202ENST00000446817 847 ntBASIC18.69■□□□□ 0.58
SSNA1O43805 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.69■□□□□ 0.58
SSNA1O43805 AL157384.1-201ENST00000445995 2473 ntBASIC18.69■□□□□ 0.58
SSNA1O43805 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSNA1O43805 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SSNA1O43805 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SSNA1O43805 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSNA1O43805 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSNA1O43805 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.68■□□□□ 0.58
SSNA1O43805 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
SSNA1O43805 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSNA1O43805 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.68■□□□□ 0.58
SSNA1O43805 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSNA1O43805 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.68■□□□□ 0.58
SSNA1O43805 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSNA1O43805 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SSNA1O43805 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SSNA1O43805 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSNA1O43805 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSNA1O43805 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SSNA1O43805 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSNA1O43805 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.67■□□□□ 0.58
SSNA1O43805 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 AC087741.3-201ENST00000624270 1347 ntBASIC18.67■□□□□ 0.58
SSNA1O43805 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSNA1O43805 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.66■□□□□ 0.58
SSNA1O43805 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SSNA1O43805 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.66■□□□□ 0.58
SSNA1O43805 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.66■□□□□ 0.58
SSNA1O43805 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SSNA1O43805 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.66■□□□□ 0.58
SSNA1O43805 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.66■□□□□ 0.58
SSNA1O43805 MIR3960-201ENST00000583311 91 ntBASIC18.66■□□□□ 0.58
SSNA1O43805 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SSNA1O43805 AC044849.2-201ENST00000606596 710 ntBASIC18.66■□□□□ 0.58
SSNA1O43805 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
SSNA1O43805 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSNA1O43805 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSNA1O43805 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L13-201ENST00000554103 1267 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L15-201ENST00000611059 1267 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L23-201ENST00000615195 1269 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L24-201ENST00000617576 1269 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L22-201ENST00000618238 1269 ntBASIC18.65■□□□□ 0.58
SSNA1O43805 DUX4L20-201ENST00000619712 1269 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms