Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NCK2O43639 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
NCK2O43639 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
NCK2O43639 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.2■■□□□ 1.46
NCK2O43639 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.2■■□□□ 1.46
NCK2O43639 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NCK2O43639 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.2■■□□□ 1.46
NCK2O43639 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.2■■□□□ 1.46
NCK2O43639 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NCK2O43639 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
NCK2O43639 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.2■■□□□ 1.46
NCK2O43639 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.2■■□□□ 1.46
NCK2O43639 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.2■■□□□ 1.46
NCK2O43639 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NCK2O43639 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
NCK2O43639 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NCK2O43639 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
NCK2O43639 C1orf229-201ENST00000623686 2258 ntBASIC24.19■■□□□ 1.46
NCK2O43639 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
NCK2O43639 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NCK2O43639 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NCK2O43639 AC123595.1-201ENST00000440769 1046 ntBASIC24.19■■□□□ 1.46
NCK2O43639 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.19■■□□□ 1.46
NCK2O43639 AL358852.1-201ENST00000623174 1268 ntBASIC24.19■■□□□ 1.46
NCK2O43639 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.19■■□□□ 1.46
NCK2O43639 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
NCK2O43639 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.19■■□□□ 1.46
NCK2O43639 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NCK2O43639 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NCK2O43639 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
NCK2O43639 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NCK2O43639 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NCK2O43639 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.18■■□□□ 1.46
NCK2O43639 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
NCK2O43639 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NCK2O43639 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NCK2O43639 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.18■■□□□ 1.46
NCK2O43639 AC092437.1-201ENST00000624794 1048 ntBASIC24.18■■□□□ 1.46
NCK2O43639 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NCK2O43639 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
NCK2O43639 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NCK2O43639 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NCK2O43639 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NCK2O43639 DUSP8P3-201ENST00000399571 1760 ntBASIC24.17■■□□□ 1.46
NCK2O43639 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.17■■□□□ 1.46
NCK2O43639 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
NCK2O43639 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.17■■□□□ 1.46
NCK2O43639 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NCK2O43639 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.17■■□□□ 1.46
NCK2O43639 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.17■■□□□ 1.46
NCK2O43639 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NCK2O43639 MIR3181-201ENST00000578512 73 ntBASIC24.17■■□□□ 1.46
NCK2O43639 AC126544.1-201ENST00000580842 1059 ntBASIC24.17■■□□□ 1.46
NCK2O43639 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.17■■□□□ 1.46
NCK2O43639 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.17■■□□□ 1.46
NCK2O43639 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.17■■□□□ 1.46
NCK2O43639 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.17■■□□□ 1.46
NCK2O43639 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NCK2O43639 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NCK2O43639 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NCK2O43639 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
NCK2O43639 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.16■■□□□ 1.46
NCK2O43639 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.16■■□□□ 1.46
NCK2O43639 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
NCK2O43639 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.16■■□□□ 1.46
NCK2O43639 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.16■■□□□ 1.46
NCK2O43639 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.15■■□□□ 1.46
NCK2O43639 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.15■■□□□ 1.46
NCK2O43639 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.15■■□□□ 1.46
NCK2O43639 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NCK2O43639 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NCK2O43639 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
NCK2O43639 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
NCK2O43639 DUX4L2-201ENST00000561772 1275 ntBASIC24.15■■□□□ 1.46
NCK2O43639 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.15■■□□□ 1.46
NCK2O43639 AC009086.3-201ENST00000623486 1008 ntBASIC24.15■■□□□ 1.46
NCK2O43639 DUX4L6-201ENST00000626483 1275 ntBASIC24.15■■□□□ 1.46
NCK2O43639 DUX4L1-201ENST00000627662 1275 ntBASIC24.15■■□□□ 1.46
NCK2O43639 DUX4L8-201ENST00000629013 1275 ntBASIC24.15■■□□□ 1.46
NCK2O43639 DUX4L3-201ENST00000630187 1275 ntBASIC24.15■■□□□ 1.46
NCK2O43639 DUX4L7-201ENST00000630678 1275 ntBASIC24.15■■□□□ 1.46
NCK2O43639 DUX4L5-201ENST00000630834 1275 ntBASIC24.15■■□□□ 1.46
NCK2O43639 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.15■■□□□ 1.46
NCK2O43639 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
NCK2O43639 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
NCK2O43639 AC131274.2-201ENST00000580697 1507 ntBASIC24.15■■□□□ 1.46
NCK2O43639 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
NCK2O43639 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NCK2O43639 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
NCK2O43639 AC027612.3-201ENST00000413684 1047 ntBASIC24.14■■□□□ 1.45
NCK2O43639 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.14■■□□□ 1.45
NCK2O43639 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.14■■□□□ 1.45
NCK2O43639 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
NCK2O43639 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.14■■□□□ 1.45
NCK2O43639 AC092068.2-201ENST00000590491 1708 ntBASIC24.14■■□□□ 1.45
NCK2O43639 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
NCK2O43639 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
NCK2O43639 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
NCK2O43639 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NCK2O43639 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms