Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ABCC4O15439 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.13■■■□□ 2.09
ABCC4O15439 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.13■■■□□ 2.09
ABCC4O15439 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ABCC4O15439 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ABCC4O15439 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCC4O15439 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ABCC4O15439 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCC4O15439 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.12■■■□□ 2.09
ABCC4O15439 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.12■■■□□ 2.09
ABCC4O15439 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCC4O15439 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCC4O15439 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.12■■■□□ 2.09
ABCC4O15439 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCC4O15439 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ABCC4O15439 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCC4O15439 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ABCC4O15439 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ABCC4O15439 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCC4O15439 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
ABCC4O15439 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
ABCC4O15439 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.1■■■□□ 2.09
ABCC4O15439 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC28.1■■■□□ 2.09
ABCC4O15439 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
ABCC4O15439 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
ABCC4O15439 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCC4O15439 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCC4O15439 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCC4O15439 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
ABCC4O15439 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
ABCC4O15439 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC28.09■■■□□ 2.09
ABCC4O15439 COMT-203ENST00000403184 2217 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.09■■■□□ 2.09
ABCC4O15439 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.09■■■□□ 2.09
ABCC4O15439 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCC4O15439 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
ABCC4O15439 C1orf229-201ENST00000623686 2258 ntBASIC28.08■■■□□ 2.09
ABCC4O15439 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.08■■■□□ 2.09
ABCC4O15439 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCC4O15439 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.08■■■□□ 2.09
ABCC4O15439 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.08■■■□□ 2.09
ABCC4O15439 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
ABCC4O15439 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCC4O15439 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCC4O15439 AC004687.1-201ENST00000579003 1625 ntBASIC28.07■■■□□ 2.08
ABCC4O15439 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCC4O15439 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.07■■■□□ 2.08
ABCC4O15439 SLC47A1P1-202ENST00000449666 945 ntBASIC28.07■■■□□ 2.08
ABCC4O15439 AL031602.1-201ENST00000633169 911 ntBASIC28.07■■■□□ 2.08
ABCC4O15439 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCC4O15439 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
ABCC4O15439 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCC4O15439 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCC4O15439 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCC4O15439 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ABCC4O15439 AC133561.1-201ENST00000568600 2415 ntBASIC28.06■■■□□ 2.08
ABCC4O15439 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ABCC4O15439 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCC4O15439 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
ABCC4O15439 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ABCC4O15439 AC133637.1-201ENST00000624115 1537 ntBASIC28.06■■■□□ 2.08
ABCC4O15439 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCC4O15439 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.06■■■□□ 2.08
ABCC4O15439 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.06■■■□□ 2.08
ABCC4O15439 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.06■■■□□ 2.08
ABCC4O15439 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.06■■■□□ 2.08
ABCC4O15439 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
ABCC4O15439 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
ABCC4O15439 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.05■■■□□ 2.08
ABCC4O15439 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.05■■■□□ 2.08
ABCC4O15439 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCC4O15439 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
ABCC4O15439 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.05■■■□□ 2.08
ABCC4O15439 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCC4O15439 AC126544.1-201ENST00000580842 1059 ntBASIC28.05■■■□□ 2.08
ABCC4O15439 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC28.05■■■□□ 2.08
ABCC4O15439 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCC4O15439 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCC4O15439 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC28.05■■■□□ 2.08
ABCC4O15439 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ABCC4O15439 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.04■■■□□ 2.08
ABCC4O15439 AC012676.1-201ENST00000574705 1949 ntBASIC28.04■■■□□ 2.08
ABCC4O15439 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ABCC4O15439 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
ABCC4O15439 TSPY26P-201ENST00000476365 1326 ntBASIC28.04■■■□□ 2.08
ABCC4O15439 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC28.03■■■□□ 2.08
ABCC4O15439 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms