Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.59■■□□□ 1.37
SPTLC1O15269 AC087623.3-201ENST00000607047 1098 ntBASIC23.59■■□□□ 1.37
SPTLC1O15269 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPTLC1O15269 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPTLC1O15269 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPTLC1O15269 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPTLC1O15269 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPTLC1O15269 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.58■■□□□ 1.36
SPTLC1O15269 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
SPTLC1O15269 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.58■■□□□ 1.36
SPTLC1O15269 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SPTLC1O15269 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SPTLC1O15269 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
SPTLC1O15269 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPTLC1O15269 MIR572-201ENST00000384983 95 ntBASIC23.57■■□□□ 1.36
SPTLC1O15269 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.57■■□□□ 1.36
SPTLC1O15269 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.57■■□□□ 1.36
SPTLC1O15269 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPTLC1O15269 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPTLC1O15269 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.57■■□□□ 1.36
SPTLC1O15269 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPTLC1O15269 AL031602.1-201ENST00000633169 911 ntBASIC23.57■■□□□ 1.36
SPTLC1O15269 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPTLC1O15269 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPTLC1O15269 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPTLC1O15269 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.56■■□□□ 1.36
SPTLC1O15269 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SPTLC1O15269 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.56■■□□□ 1.36
SPTLC1O15269 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.56■■□□□ 1.36
SPTLC1O15269 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SPTLC1O15269 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.56■■□□□ 1.36
SPTLC1O15269 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.56■■□□□ 1.36
SPTLC1O15269 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.56■■□□□ 1.36
SPTLC1O15269 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SPTLC1O15269 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPTLC1O15269 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.55■■□□□ 1.36
SPTLC1O15269 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPTLC1O15269 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPTLC1O15269 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.55■■□□□ 1.36
SPTLC1O15269 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.55■■□□□ 1.36
SPTLC1O15269 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPTLC1O15269 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.54■■□□□ 1.36
SPTLC1O15269 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.54■■□□□ 1.36
SPTLC1O15269 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPTLC1O15269 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
SPTLC1O15269 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPTLC1O15269 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPTLC1O15269 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPTLC1O15269 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPTLC1O15269 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SPTLC1O15269 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SPTLC1O15269 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPTLC1O15269 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SPTLC1O15269 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPTLC1O15269 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.53■■□□□ 1.36
SPTLC1O15269 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SPTLC1O15269 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPTLC1O15269 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPTLC1O15269 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPTLC1O15269 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.53■■□□□ 1.36
SPTLC1O15269 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.53■■□□□ 1.36
SPTLC1O15269 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPTLC1O15269 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SPTLC1O15269 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPTLC1O15269 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.53■■□□□ 1.36
SPTLC1O15269 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.53■■□□□ 1.36
SPTLC1O15269 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.52■■□□□ 1.36
SPTLC1O15269 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SPTLC1O15269 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SPTLC1O15269 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SPTLC1O15269 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SPTLC1O15269 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.52■■□□□ 1.36
SPTLC1O15269 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.52■■□□□ 1.36
SPTLC1O15269 MIR6084-201ENST00000622012 110 ntBASIC23.52■■□□□ 1.36
SPTLC1O15269 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
SPTLC1O15269 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPTLC1O15269 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.52■■□□□ 1.36
SPTLC1O15269 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SPTLC1O15269 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPTLC1O15269 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPTLC1O15269 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPTLC1O15269 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.51■■□□□ 1.35
SPTLC1O15269 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.51■■□□□ 1.35
SPTLC1O15269 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPTLC1O15269 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
SPTLC1O15269 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.51■■□□□ 1.35
SPTLC1O15269 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.51■■□□□ 1.35
SPTLC1O15269 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPTLC1O15269 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.5■■□□□ 1.35
SPTLC1O15269 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.5■■□□□ 1.35
SPTLC1O15269 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPTLC1O15269 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPTLC1O15269 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.5■■□□□ 1.35
SPTLC1O15269 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SPTLC1O15269 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.5■■□□□ 1.35
SPTLC1O15269 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.5■■□□□ 1.35
SPTLC1O15269 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPTLC1O15269 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SPTLC1O15269 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPTLC1O15269 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms