Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMAD9O15198 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
SMAD9O15198 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.86■□□□□ 0.77
SMAD9O15198 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.85■□□□□ 0.77
SMAD9O15198 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 AC019069.1-201ENST00000610008 1333 ntBASIC19.85■□□□□ 0.77
SMAD9O15198 AC135279.3-201ENST00000610945 1311 ntBASIC19.85■□□□□ 0.77
SMAD9O15198 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SMAD9O15198 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD9O15198 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMAD9O15198 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD9O15198 AC024257.2-201ENST00000549699 147 ntBASIC19.85■□□□□ 0.77
SMAD9O15198 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.85■□□□□ 0.77
SMAD9O15198 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 DUSP8P5-201ENST00000422884 1815 ntBASIC19.85■□□□□ 0.77
SMAD9O15198 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.85■□□□□ 0.77
SMAD9O15198 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SMAD9O15198 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMAD9O15198 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.84■□□□□ 0.77
SMAD9O15198 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.84■□□□□ 0.77
SMAD9O15198 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
SMAD9O15198 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SMAD9O15198 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SMAD9O15198 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.84■□□□□ 0.77
SMAD9O15198 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD9O15198 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.83■□□□□ 0.77
SMAD9O15198 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD9O15198 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD9O15198 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.83■□□□□ 0.77
SMAD9O15198 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SMAD9O15198 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.83■□□□□ 0.77
SMAD9O15198 PBX2P1-201ENST00000493219 1291 ntBASIC19.83■□□□□ 0.77
SMAD9O15198 AC136469.2-201ENST00000623944 1028 ntBASIC19.83■□□□□ 0.77
SMAD9O15198 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.83■□□□□ 0.77
SMAD9O15198 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMAD9O15198 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SMAD9O15198 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.83■□□□□ 0.76
SMAD9O15198 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMAD9O15198 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMAD9O15198 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMAD9O15198 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMAD9O15198 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD9O15198 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.82■□□□□ 0.76
SMAD9O15198 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.82■□□□□ 0.76
SMAD9O15198 AC133637.1-201ENST00000624115 1537 ntBASIC19.82■□□□□ 0.76
SMAD9O15198 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD9O15198 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD9O15198 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMAD9O15198 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD9O15198 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.82■□□□□ 0.76
SMAD9O15198 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.82■□□□□ 0.76
SMAD9O15198 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.82■□□□□ 0.76
SMAD9O15198 AC106739.1-201ENST00000617035 715 ntBASIC19.82■□□□□ 0.76
SMAD9O15198 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD9O15198 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD9O15198 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMAD9O15198 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SMAD9O15198 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.81■□□□□ 0.76
SMAD9O15198 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.81■□□□□ 0.76
SMAD9O15198 MIR4767-201ENST00000582827 78 ntBASIC19.81■□□□□ 0.76
SMAD9O15198 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.81■□□□□ 0.76
SMAD9O15198 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SMAD9O15198 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD9O15198 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMAD9O15198 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD9O15198 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD9O15198 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMAD9O15198 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMAD9O15198 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD9O15198 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.8■□□□□ 0.76
SMAD9O15198 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
SMAD9O15198 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.8■□□□□ 0.76
SMAD9O15198 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms