Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.55■□□□□ 0.88
SNPHO15079 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNPHO15079 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNPHO15079 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SNPHO15079 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.54■□□□□ 0.88
SNPHO15079 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNPHO15079 AC137767.1-201ENST00000602918 1920 ntBASIC20.54■□□□□ 0.88
SNPHO15079 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNPHO15079 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SNPHO15079 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNPHO15079 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.54■□□□□ 0.88
SNPHO15079 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNPHO15079 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SNPHO15079 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNPHO15079 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.53■□□□□ 0.88
SNPHO15079 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNPHO15079 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNPHO15079 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNPHO15079 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNPHO15079 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.53■□□□□ 0.88
SNPHO15079 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SNPHO15079 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNPHO15079 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SNPHO15079 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNPHO15079 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNPHO15079 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNPHO15079 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNPHO15079 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.52■□□□□ 0.88
SNPHO15079 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNPHO15079 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNPHO15079 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNPHO15079 AC019069.1-201ENST00000610008 1333 ntBASIC20.52■□□□□ 0.87
SNPHO15079 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SNPHO15079 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNPHO15079 AC007375.3-201ENST00000600936 2314 ntBASIC20.52■□□□□ 0.87
SNPHO15079 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.51■□□□□ 0.87
SNPHO15079 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNPHO15079 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.51■□□□□ 0.87
SNPHO15079 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SNPHO15079 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNPHO15079 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.51■□□□□ 0.87
SNPHO15079 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNPHO15079 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.51■□□□□ 0.87
SNPHO15079 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNPHO15079 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNPHO15079 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.51■□□□□ 0.87
SNPHO15079 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNPHO15079 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNPHO15079 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNPHO15079 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNPHO15079 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.5■□□□□ 0.87
SNPHO15079 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNPHO15079 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.5■□□□□ 0.87
SNPHO15079 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.5■□□□□ 0.87
SNPHO15079 AC092171.4-201ENST00000609130 632 ntBASIC20.5■□□□□ 0.87
SNPHO15079 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNPHO15079 AC241377.3-202ENST00000626088 1088 ntBASIC20.5■□□□□ 0.87
SNPHO15079 AC241585.3-202ENST00000628937 1088 ntBASIC20.5■□□□□ 0.87
SNPHO15079 AC245100.8-202ENST00000629247 1058 ntBASIC20.5■□□□□ 0.87
SNPHO15079 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNPHO15079 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNPHO15079 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNPHO15079 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNPHO15079 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNPHO15079 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNPHO15079 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNPHO15079 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.49■□□□□ 0.87
SNPHO15079 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SNPHO15079 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNPHO15079 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNPHO15079 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.49■□□□□ 0.87
SNPHO15079 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.49■□□□□ 0.87
SNPHO15079 AC096631.2-201ENST00000436136 790 ntBASIC20.49■□□□□ 0.87
SNPHO15079 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.49■□□□□ 0.87
SNPHO15079 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.49■□□□□ 0.87
SNPHO15079 AC099791.2-201ENST00000605725 427 ntBASIC20.49■□□□□ 0.87
SNPHO15079 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SNPHO15079 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.49■□□□□ 0.87
SNPHO15079 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNPHO15079 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.49■□□□□ 0.87
SNPHO15079 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNPHO15079 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNPHO15079 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNPHO15079 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNPHO15079 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms