Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.51■■□□□ 1.19
TRAFD1O14545 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.51■■□□□ 1.19
TRAFD1O14545 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.51■■□□□ 1.19
TRAFD1O14545 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAFD1O14545 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.5■■□□□ 1.19
TRAFD1O14545 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAFD1O14545 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.5■■□□□ 1.19
TRAFD1O14545 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.5■■□□□ 1.19
TRAFD1O14545 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.5■■□□□ 1.19
TRAFD1O14545 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRAFD1O14545 MIR3181-201ENST00000578512 73 ntBASIC22.5■■□□□ 1.19
TRAFD1O14545 AL353803.4-201ENST00000565882 1934 ntBASIC22.5■■□□□ 1.19
TRAFD1O14545 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAFD1O14545 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAFD1O14545 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAFD1O14545 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAFD1O14545 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAFD1O14545 ECEL1P1-201ENST00000373592 1742 ntBASIC22.49■■□□□ 1.19
TRAFD1O14545 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAFD1O14545 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRAFD1O14545 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAFD1O14545 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRAFD1O14545 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.49■■□□□ 1.19
TRAFD1O14545 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAFD1O14545 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAFD1O14545 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRAFD1O14545 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAFD1O14545 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRAFD1O14545 AL138724.1-201ENST00000606771 1088 ntBASIC22.49■■□□□ 1.19
TRAFD1O14545 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TRAFD1O14545 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAFD1O14545 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.49■■□□□ 1.19
TRAFD1O14545 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRAFD1O14545 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAFD1O14545 GUSBP5-202ENST00000510805 1989 ntBASIC22.49■■□□□ 1.19
TRAFD1O14545 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAFD1O14545 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TRAFD1O14545 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAFD1O14545 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAFD1O14545 AL136162.1-201ENST00000607711 1078 ntBASIC22.48■■□□□ 1.19
TRAFD1O14545 AC106739.1-201ENST00000617035 715 ntBASIC22.48■■□□□ 1.19
TRAFD1O14545 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAFD1O14545 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAFD1O14545 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAFD1O14545 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAFD1O14545 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAFD1O14545 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAFD1O14545 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAFD1O14545 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAFD1O14545 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRAFD1O14545 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAFD1O14545 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRAFD1O14545 AC024257.2-201ENST00000549699 147 ntBASIC22.47■■□□□ 1.19
TRAFD1O14545 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAFD1O14545 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.47■■□□□ 1.19
TRAFD1O14545 AL499627.2-201ENST00000606283 725 ntBASIC22.47■■□□□ 1.19
TRAFD1O14545 pRNA.6-201ENST00000610482 90 ntBASIC22.47■■□□□ 1.19
TRAFD1O14545 pRNA.5-201ENST00000612139 90 ntBASIC22.47■■□□□ 1.19
TRAFD1O14545 pRNA.11-201ENST00000618423 90 ntBASIC22.47■■□□□ 1.19
TRAFD1O14545 pRNA.13-201ENST00000619112 90 ntBASIC22.47■■□□□ 1.19
TRAFD1O14545 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.47■■□□□ 1.19
TRAFD1O14545 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAFD1O14545 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.47■■□□□ 1.19
TRAFD1O14545 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.47■■□□□ 1.19
TRAFD1O14545 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TRAFD1O14545 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.47■■□□□ 1.19
TRAFD1O14545 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAFD1O14545 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAFD1O14545 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TRAFD1O14545 AC011298.3-201ENST00000615796 283 ntBASIC22.46■■□□□ 1.19
TRAFD1O14545 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.46■■□□□ 1.19
TRAFD1O14545 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAFD1O14545 AC135279.3-201ENST00000610945 1311 ntBASIC22.46■■□□□ 1.19
TRAFD1O14545 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAFD1O14545 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAFD1O14545 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAFD1O14545 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRAFD1O14545 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TRAFD1O14545 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.19
TRAFD1O14545 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAFD1O14545 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAFD1O14545 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
TRAFD1O14545 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAFD1O14545 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.45■■□□□ 1.18
TRAFD1O14545 PBX2P1-201ENST00000493219 1291 ntBASIC22.45■■□□□ 1.18
TRAFD1O14545 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.45■■□□□ 1.18
TRAFD1O14545 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
TRAFD1O14545 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.45■■□□□ 1.18
TRAFD1O14545 DUSP8P3-201ENST00000399571 1760 ntBASIC22.45■■□□□ 1.18
TRAFD1O14545 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAFD1O14545 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRAFD1O14545 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.45■■□□□ 1.18
TRAFD1O14545 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRAFD1O14545 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms