Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.81■■□□□ 1.4
SOX1O00570 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SOX1O00570 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX1O00570 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX1O00570 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX1O00570 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SOX1O00570 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOX1O00570 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOX1O00570 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOX1O00570 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.8■■□□□ 1.4
SOX1O00570 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SOX1O00570 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.8■■□□□ 1.4
SOX1O00570 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.8■■□□□ 1.4
SOX1O00570 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SOX1O00570 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOX1O00570 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.8■■□□□ 1.4
SOX1O00570 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.8■■□□□ 1.4
SOX1O00570 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.8■■□□□ 1.4
SOX1O00570 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOX1O00570 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.8■■□□□ 1.4
SOX1O00570 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SOX1O00570 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SOX1O00570 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.79■■□□□ 1.4
SOX1O00570 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.79■■□□□ 1.4
SOX1O00570 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SOX1O00570 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.79■■□□□ 1.4
SOX1O00570 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.79■■□□□ 1.4
SOX1O00570 MYCNOS-205ENST00000641950 531 ntBASIC23.79■■□□□ 1.4
SOX1O00570 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SOX1O00570 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.79■■□□□ 1.4
SOX1O00570 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SOX1O00570 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.78■■□□□ 1.4
SOX1O00570 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SOX1O00570 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SOX1O00570 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.78■■□□□ 1.4
SOX1O00570 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.78■■□□□ 1.4
SOX1O00570 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.78■■□□□ 1.4
SOX1O00570 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SOX1O00570 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.78■■□□□ 1.4
SOX1O00570 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SOX1O00570 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.78■■□□□ 1.4
SOX1O00570 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SOX1O00570 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SOX1O00570 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.78■■□□□ 1.4
SOX1O00570 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SOX1O00570 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SOX1O00570 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SOX1O00570 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.77■■□□□ 1.4
SOX1O00570 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
SOX1O00570 AC083880.1-201ENST00000608266 535 ntBASIC23.77■■□□□ 1.4
SOX1O00570 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SOX1O00570 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SOX1O00570 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
SOX1O00570 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.76■■□□□ 1.39
SOX1O00570 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.76■■□□□ 1.39
SOX1O00570 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.76■■□□□ 1.39
SOX1O00570 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.76■■□□□ 1.39
SOX1O00570 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SOX1O00570 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SOX1O00570 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.76■■□□□ 1.39
SOX1O00570 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SOX1O00570 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SOX1O00570 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.75■■□□□ 1.39
SOX1O00570 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOX1O00570 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.75■■□□□ 1.39
SOX1O00570 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.75■■□□□ 1.39
SOX1O00570 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOX1O00570 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.75■■□□□ 1.39
SOX1O00570 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.74■■□□□ 1.39
SOX1O00570 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.74■■□□□ 1.39
SOX1O00570 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SOX1O00570 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SOX1O00570 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
SOX1O00570 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SOX1O00570 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.74■■□□□ 1.39
SOX1O00570 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.74■■□□□ 1.39
SOX1O00570 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.74■■□□□ 1.39
SOX1O00570 REXO1L12P-201ENST00000622156 912 ntBASIC23.74■■□□□ 1.39
SOX1O00570 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SOX1O00570 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.73■■□□□ 1.39
SOX1O00570 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SOX1O00570 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SOX1O00570 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SOX1O00570 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SOX1O00570 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SOX1O00570 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SOX1O00570 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.73■■□□□ 1.39
SOX1O00570 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.73■■□□□ 1.39
SOX1O00570 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SOX1O00570 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SOX1O00570 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.72■■□□□ 1.39
SOX1O00570 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SOX1O00570 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.72■■□□□ 1.39
SOX1O00570 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.72■■□□□ 1.39
SOX1O00570 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SOX1O00570 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.72■■□□□ 1.39
SOX1O00570 MKRN4P-201ENST00000444706 1521 ntBASIC23.72■■□□□ 1.39
SOX1O00570 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SOX1O00570 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.72■■□□□ 1.39
SOX1O00570 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms