Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXE1O00358 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
FOXE1O00358 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.01■□□□□ 0.95
FOXE1O00358 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.01■□□□□ 0.95
FOXE1O00358 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
FOXE1O00358 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
FOXE1O00358 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXE1O00358 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 EP400NL-214ENST00000641289 2402 ntBASIC21■□□□□ 0.95
FOXE1O00358 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXE1O00358 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21■□□□□ 0.95
FOXE1O00358 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FOXE1O00358 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21■□□□□ 0.95
FOXE1O00358 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
FOXE1O00358 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21■□□□□ 0.95
FOXE1O00358 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21■□□□□ 0.95
FOXE1O00358 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21■□□□□ 0.95
FOXE1O00358 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
FOXE1O00358 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXE1O00358 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
FOXE1O00358 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
FOXE1O00358 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXE1O00358 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXE1O00358 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
FOXE1O00358 AC131281.2-201ENST00000520478 145 ntBASIC20.99■□□□□ 0.95
FOXE1O00358 DUX4L19-201ENST00000557448 1267 ntBASIC20.99■□□□□ 0.95
FOXE1O00358 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXE1O00358 AC139530.1-201ENST00000575312 1977 ntBASIC20.99■□□□□ 0.95
FOXE1O00358 AC080038.3-201ENST00000623346 1952 ntBASIC20.99■□□□□ 0.95
FOXE1O00358 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXE1O00358 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXE1O00358 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
FOXE1O00358 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
FOXE1O00358 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXE1O00358 AL138724.1-201ENST00000606771 1088 ntBASIC20.98■□□□□ 0.95
FOXE1O00358 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXE1O00358 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXE1O00358 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXE1O00358 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXE1O00358 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXE1O00358 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXE1O00358 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
FOXE1O00358 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
FOXE1O00358 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.97■□□□□ 0.95
FOXE1O00358 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXE1O00358 AL031602.1-201ENST00000633169 911 ntBASIC20.97■□□□□ 0.95
FOXE1O00358 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXE1O00358 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXE1O00358 AC137767.1-201ENST00000602918 1920 ntBASIC20.96■□□□□ 0.95
FOXE1O00358 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXE1O00358 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXE1O00358 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXE1O00358 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXE1O00358 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXE1O00358 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXE1O00358 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXE1O00358 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXE1O00358 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXE1O00358 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXE1O00358 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXE1O00358 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
FOXE1O00358 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
FOXE1O00358 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXE1O00358 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXE1O00358 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.95■□□□□ 0.94
FOXE1O00358 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXE1O00358 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.95■□□□□ 0.94
FOXE1O00358 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.95■□□□□ 0.94
FOXE1O00358 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
FOXE1O00358 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
FOXE1O00358 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXE1O00358 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXE1O00358 AC092053.2-201ENST00000640557 1818 ntBASIC20.94■□□□□ 0.94
FOXE1O00358 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
FOXE1O00358 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
FOXE1O00358 SYT6-210ENST00000641643 1587 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms