Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 NTF6A-201ENST00000591175 560 ntBASIC20.3■□□□□ 0.84
TNFRSF11BO00300 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 LINC01529-204ENST00000636474 1715 ntBASIC20.29■□□□□ 0.84
TNFRSF11BO00300 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF11BO00300 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 AC010980.1-201ENST00000587192 1142 ntBASIC20.28■□□□□ 0.84
TNFRSF11BO00300 SNX5-217ENST00000606557 1087 ntBASIC20.28■□□□□ 0.84
TNFRSF11BO00300 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF11BO00300 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 ABHD17AP5-201ENST00000580133 923 ntBASIC20.27■□□□□ 0.84
TNFRSF11BO00300 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF11BO00300 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNFRSF11BO00300 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.27■□□□□ 0.83
TNFRSF11BO00300 AC026310.3-201ENST00000625186 2373 ntBASIC20.27■□□□□ 0.83
TNFRSF11BO00300 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TNFRSF11BO00300 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 AC004987.1-201ENST00000428627 508 ntBASIC20.26■□□□□ 0.83
TNFRSF11BO00300 ATP5G2P3-201ENST00000429083 425 ntBASIC20.26■□□□□ 0.83
TNFRSF11BO00300 FAM99A-202ENST00000538190 1989 ntBASIC20.26■□□□□ 0.83
TNFRSF11BO00300 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF11BO00300 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 AC010542.4-201ENST00000563151 1910 ntBASIC20.25■□□□□ 0.83
TNFRSF11BO00300 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFRSF11BO00300 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 LINC01960-201ENST00000563759 1884 ntBASIC20.24■□□□□ 0.83
TNFRSF11BO00300 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 FP325331.1-202ENST00000623531 1380 ntBASIC20.24■□□□□ 0.83
TNFRSF11BO00300 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF11BO00300 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFRSF11BO00300 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms