Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 C17orf82-201ENST00000623772 1530 ntBASIC17.56■□□□□ 0.4
CGB1A6NKQ9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CGB1A6NKQ9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CGB1A6NKQ9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.54■□□□□ 0.4
CGB1A6NKQ9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGB1A6NKQ9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 MIR6724-1-201ENST00000616420 92 ntBASIC17.53■□□□□ 0.4
CGB1A6NKQ9 MIR6724-2-201ENST00000616483 92 ntBASIC17.53■□□□□ 0.4
CGB1A6NKQ9 MIR6724-4-201ENST00000617390 92 ntBASIC17.53■□□□□ 0.4
CGB1A6NKQ9 MIR6724-3-201ENST00000622482 92 ntBASIC17.53■□□□□ 0.4
CGB1A6NKQ9 AC009086.3-201ENST00000623486 1008 ntBASIC17.53■□□□□ 0.4
CGB1A6NKQ9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.53■□□□□ 0.4
CGB1A6NKQ9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CGB1A6NKQ9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CGB1A6NKQ9 PKD1P6-201ENST00000343738 4769 ntBASIC17.52■□□□□ 0.4
CGB1A6NKQ9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CGB1A6NKQ9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CGB1A6NKQ9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CGB1A6NKQ9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.52■□□□□ 0.4
CGB1A6NKQ9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CGB1A6NKQ9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CGB1A6NKQ9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CGB1A6NKQ9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CGB1A6NKQ9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CGB1A6NKQ9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CGB1A6NKQ9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CGB1A6NKQ9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.52■□□□□ 0.39
CGB1A6NKQ9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 AL035685.1-201ENST00000636663 812 ntBASIC17.51■□□□□ 0.39
CGB1A6NKQ9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CGB1A6NKQ9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CGB1A6NKQ9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms