Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TVP23AA6NH52 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TVP23AA6NH52 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TVP23AA6NH52 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TVP23AA6NH52 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TVP23AA6NH52 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TVP23AA6NH52 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.6■□□□□ 0.73
TVP23AA6NH52 TSPY9P-201ENST00000440215 945 ntBASIC19.6■□□□□ 0.73
TVP23AA6NH52 TSPY11P-201ENST00000442607 1045 ntBASIC19.6■□□□□ 0.73
TVP23AA6NH52 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TVP23AA6NH52 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TVP23AA6NH52 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.6■□□□□ 0.73
TVP23AA6NH52 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TVP23AA6NH52 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.59■□□□□ 0.73
TVP23AA6NH52 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TVP23AA6NH52 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TVP23AA6NH52 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.59■□□□□ 0.73
TVP23AA6NH52 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TVP23AA6NH52 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TVP23AA6NH52 AC009102.2-201ENST00000606772 1639 ntBASIC19.58■□□□□ 0.73
TVP23AA6NH52 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TVP23AA6NH52 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TVP23AA6NH52 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TVP23AA6NH52 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TVP23AA6NH52 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TVP23AA6NH52 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TVP23AA6NH52 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.58■□□□□ 0.73
TVP23AA6NH52 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TVP23AA6NH52 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
TVP23AA6NH52 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TVP23AA6NH52 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TVP23AA6NH52 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TVP23AA6NH52 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TVP23AA6NH52 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.58■□□□□ 0.72
TVP23AA6NH52 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TVP23AA6NH52 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TVP23AA6NH52 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.57■□□□□ 0.72
TVP23AA6NH52 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TVP23AA6NH52 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
TVP23AA6NH52 AC009299.2-201ENST00000482477 511 ntBASIC19.57■□□□□ 0.72
TVP23AA6NH52 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TVP23AA6NH52 AC010997.5-201ENST00000609182 354 ntBASIC19.57■□□□□ 0.72
TVP23AA6NH52 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TVP23AA6NH52 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TVP23AA6NH52 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TVP23AA6NH52 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
TVP23AA6NH52 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
TVP23AA6NH52 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TVP23AA6NH52 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TVP23AA6NH52 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TVP23AA6NH52 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TVP23AA6NH52 AC092053.2-201ENST00000640557 1818 ntBASIC19.56■□□□□ 0.72
TVP23AA6NH52 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TVP23AA6NH52 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TVP23AA6NH52 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TVP23AA6NH52 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TVP23AA6NH52 DUX4L4-201ENST00000566884 1269 ntBASIC19.56■□□□□ 0.72
TVP23AA6NH52 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.56■□□□□ 0.72
TVP23AA6NH52 AL451085.2-201ENST00000605085 799 ntBASIC19.56■□□□□ 0.72
TVP23AA6NH52 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TVP23AA6NH52 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.55■□□□□ 0.72
TVP23AA6NH52 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TVP23AA6NH52 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TVP23AA6NH52 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TVP23AA6NH52 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TVP23AA6NH52 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.55■□□□□ 0.72
TVP23AA6NH52 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TVP23AA6NH52 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TVP23AA6NH52 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TVP23AA6NH52 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TVP23AA6NH52 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
TVP23AA6NH52 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TVP23AA6NH52 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TVP23AA6NH52 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TVP23AA6NH52 AC009086.3-201ENST00000623486 1008 ntBASIC19.54■□□□□ 0.72
TVP23AA6NH52 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TVP23AA6NH52 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TVP23AA6NH52 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TVP23AA6NH52 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.54■□□□□ 0.72
TVP23AA6NH52 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TVP23AA6NH52 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms