Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L3A6NE82 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 ANOS2P-203ENST00000472227 1816 ntBASIC19.47■□□□□ 0.71
MBD3L3A6NE82 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 AC022517.1-201ENST00000592429 346 ntBASIC19.47■□□□□ 0.71
MBD3L3A6NE82 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L3A6NE82 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.46■□□□□ 0.71
MBD3L3A6NE82 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 TPRG1LP1-201ENST00000598702 760 ntBASIC19.45■□□□□ 0.7
MBD3L3A6NE82 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L3A6NE82 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 OXCT2P1-201ENST00000447263 1535 ntBASIC19.44■□□□□ 0.7
MBD3L3A6NE82 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
MBD3L3A6NE82 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 BX005040.4-201ENST00000637145 1518 ntBASIC19.43■□□□□ 0.7
MBD3L3A6NE82 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 SMUG1P1-201ENST00000590640 811 ntBASIC19.43■□□□□ 0.7
MBD3L3A6NE82 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
MBD3L3A6NE82 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD3L3A6NE82 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MBD3L3A6NE82 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms