Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3L4A6NDZ8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 ANOS2P-203ENST00000472227 1816 ntBASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 AC022517.1-201ENST00000592429 346 ntBASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3L4A6NDZ8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.46■□□□□ 0.71
MBD3L4A6NDZ8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 TPRG1LP1-201ENST00000598702 760 ntBASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3L4A6NDZ8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 OXCT2P1-201ENST00000447263 1535 ntBASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
MBD3L4A6NDZ8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 BX005040.4-201ENST00000637145 1518 ntBASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 SMUG1P1-201ENST00000590640 811 ntBASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD3L4A6NDZ8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MBD3L4A6NDZ8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms