Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 THA1P-201ENST00000590384 1145 ntBASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AC144652.1-201ENST00000609974 1624 ntBASIC16.67■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 FAM99A-202ENST00000538190 1989 ntBASIC16.66■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-1A0A0A6YYK1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
TRAV8-1A0A0A6YYK1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 BHLHE23-202ENST00000612929 1109 ntBASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-1A0A0A6YYK1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 KRT18P24-201ENST00000344739 1156 ntBASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV8-1A0A0A6YYK1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 AC010542.4-201ENST00000563151 1910 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms