Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV18A0A075B6X5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV18A0A075B6X5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 AC010542.4-201ENST00000563151 1910 ntBASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 MIR4449-201ENST00000578365 66 ntBASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV18A0A075B6X5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 AC022616.5-201ENST00000518796 181 ntBASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV18A0A075B6X5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAV18A0A075B6X5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.83■□□□□ 0.61
TRAV18A0A075B6X5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAV18A0A075B6X5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV18A0A075B6X5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV18A0A075B6X5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 AC004448.1-201ENST00000458332 883 ntBASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV18A0A075B6X5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 AC144652.1-201ENST00000609974 1624 ntBASIC18.82■□□□□ 0.6
TRAV18A0A075B6X5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms