Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 AL359881.3-201ENST00000602640 1721 ntBASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 SMIM23-201ENST00000330910 468 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 ZNF847P-201ENST00000412638 1077 ntBASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 OR13E1P-201ENST00000417104 922 ntBASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 LINC00539-203ENST00000434601 960 ntTSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 RPS8P4-201ENST00000454541 627 ntBASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 AAMDC-211ENST00000533193 606 ntTSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 AL359397.1-201ENST00000556713 501 ntTSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 TRIM64C-201ENST00000617704 1353 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
RIMBP3Q9UFD9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AC124303.2-201ENST00000623883 1449 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 HNRNPA1P6-202ENST00000631770 1447 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 SCML4-204ENST00000369025 1534 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AC087203.3-201ENST00000602981 1547 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AC018737.2-201ENST00000624478 1512 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 HTR7P1-202ENST00000624664 4411 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 ZSWIM5P2-201ENST00000420212 2038 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AGAP10P-201ENST00000454844 2418 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 ZDHHC20P4-201ENST00000411421 1007 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 RBM22P3-201ENST00000430648 954 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AL669818.1-201ENST00000440419 607 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 DNM1P24-201ENST00000441091 490 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 RN7SL798P-201ENST00000468562 301 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AC091429.1-201ENST00000486625 651 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 SNCA-207ENST00000502987 731 ntTSL 2 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AL512310.4-201ENST00000548456 411 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AC117498.1-201ENST00000548742 713 ntTSL 2 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 PCAT29-203ENST00000559212 647 ntTSL 3 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 AC009065.2-202ENST00000563284 506 ntTSL 3 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 PIP5K1P1-201ENST00000460661 1656 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 KCTD21-AS1-207ENST00000600795 1549 ntBASIC19.31■□□□□ 0.68
RIMBP3Q9UFD9 SLC35F4-201ENST00000339762 1779 ntTSL 5 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 NBPF13P-201ENST00000444082 1783 ntBASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 FAM170A-206ENST00000613773 1374 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 SRGN-201ENST00000242465 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 TRAV4-201ENST00000390426 395 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 GNLY-202ENST00000409696 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 PRKX-AS1-201ENST00000414074 516 ntTSL 5 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 MED6-203ENST00000440435 931 ntTSL 2 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 RN7SL260P-201ENST00000521103 282 ntBASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 MIR3943-201ENST00000585069 100 ntBASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 AC243960.1-202ENST00000601116 601 ntTSL 2 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 AL137796.1-201ENST00000608190 577 ntBASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 SRP54-AS1-205ENST00000636540 565 ntBASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 KNOP1P4-201ENST00000445020 1438 ntBASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 ASTN2-203ENST00000341734 1757 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 AC092819.1-201ENST00000519981 1690 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 PCNP-204ENST00000469941 2028 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIMBP3Q9UFD9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 LINC01251-202ENST00000444956 486 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 CSH1-203ENST00000453363 632 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 PVT1-216ENST00000523068 844 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 ARL2-206ENST00000533729 795 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AC018563.1-201ENST00000558089 566 ntTSL 4 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 HMBOX1-IT1-201ENST00000558292 347 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 ZNF430-206ENST00000599548 595 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AL158801.4-201ENST00000605294 459 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms