Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 MIR6770-3-201ENST00000616362 60 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 MIR6770-2-201ENST00000618304 60 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 MIR6770-1-201ENST00000622248 60 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 CICP7-201ENST00000432723 2477 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 CSPG4P12-201ENST00000558282 4853 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 GOLGA8CP-201ENST00000446144 5237 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AL606760.3-201ENST00000569869 3591 ntBASIC10.67□□□□□ -0.7
RAB40CQ96S21 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 KRT8P42-201ENST00000405771 1399 ntBASIC10.67□□□□□ -0.7
RAB40CQ96S21 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 DTX2P1-201ENST00000425797 1633 ntBASIC10.67□□□□□ -0.7
RAB40CQ96S21 NTM-206ENST00000427481 2583 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 HNRNPA1P32-201ENST00000396326 963 ntBASIC10.67□□□□□ -0.7
RAB40CQ96S21 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.67□□□□□ -0.7
RAB40CQ96S21 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 AC244107.1-201ENST00000442033 332 ntBASIC10.67□□□□□ -0.7
RAB40CQ96S21 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 AC044849.1-201ENST00000519737 1188 ntBASIC10.67□□□□□ -0.7
RAB40CQ96S21 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB40CQ96S21 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC10.66□□□□□ -0.7
RAB40CQ96S21 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB40CQ96S21 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
RAB40CQ96S21 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB40CQ96S21 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB40CQ96S21 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms