Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 EEF1DP5-201ENST00000431410 772 ntBASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 RPE-208ENST00000436630 1128 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 AC026271.1-201ENST00000447794 1348 ntBASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 POM121L14P-201ENST00000406100 1558 ntBASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC060814.4-201ENST00000594169 2163 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 SRL-202ENST00000537996 1814 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AL356653.1-201ENST00000402743 360 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 PSME2P2-201ENST00000453033 700 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC023906.1-201ENST00000486386 453 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC099328.1-201ENST00000498809 1030 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC114812.4-201ENST00000506676 757 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 FAM213AP2-201ENST00000521579 683 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC004923.3-201ENST00000527532 355 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 GRAMD4P6-201ENST00000556999 244 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AP000553.2-201ENST00000609038 441 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 PCDHB18P-202ENST00000526308 3197 ntBASIC11.98□□□□□ -0.49
NPIPA3F8WFD2 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms