Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.47□□□□□ -0.41
CLK1P49759 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.47□□□□□ -0.41
CLK1P49759 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.47□□□□□ -0.41
CLK1P49759 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.47□□□□□ -0.41
CLK1P49759 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.47□□□□□ -0.41
CLK1P49759 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
CLK1P49759 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.47□□□□□ -0.41
CLK1P49759 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.47□□□□□ -0.41
CLK1P49759 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.47□□□□□ -0.41
CLK1P49759 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 AC084346.2-201ENST00000607097 949 ntBASIC12.47□□□□□ -0.41
CLK1P49759 AL031673.1-201ENST00000611460 466 ntBASIC12.47□□□□□ -0.41
CLK1P49759 AC091769.1-201ENST00000619576 568 ntBASIC12.47□□□□□ -0.41
CLK1P49759 AC007718.1-201ENST00000621078 280 ntBASIC12.47□□□□□ -0.41
CLK1P49759 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CLK1P49759 RCC2P5-201ENST00000492126 1487 ntBASIC12.46□□□□□ -0.41
CLK1P49759 KRT8P19-201ENST00000551916 1455 ntBASIC12.46□□□□□ -0.41
CLK1P49759 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.46□□□□□ -0.41
CLK1P49759 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.46□□□□□ -0.41
CLK1P49759 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 AC112176.1-201ENST00000565428 3024 ntBASIC12.46□□□□□ -0.41
CLK1P49759 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.46□□□□□ -0.41
CLK1P49759 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.46□□□□□ -0.41
CLK1P49759 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 AC009549.1-201ENST00000603468 1686 ntBASIC12.46□□□□□ -0.41
CLK1P49759 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.46□□□□□ -0.41
CLK1P49759 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.46□□□□□ -0.41
CLK1P49759 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 GUSBP10-201ENST00000417412 665 ntBASIC12.46□□□□□ -0.41
CLK1P49759 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.46□□□□□ -0.41
CLK1P49759 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.46□□□□□ -0.41
CLK1P49759 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.46□□□□□ -0.41
CLK1P49759 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.46□□□□□ -0.41
CLK1P49759 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.46□□□□□ -0.41
CLK1P49759 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.46□□□□□ -0.41
CLK1P49759 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
CLK1P49759 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.46□□□□□ -0.41
CLK1P49759 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.46□□□□□ -0.41
CLK1P49759 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.46□□□□□ -0.41
CLK1P49759 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.46□□□□□ -0.41
CLK1P49759 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.46□□□□□ -0.41
CLK1P49759 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.46□□□□□ -0.41
CLK1P49759 MIR4522-201ENST00000584932 87 ntBASIC12.46□□□□□ -0.41
CLK1P49759 AC087392.5-201ENST00000612517 489 ntBASIC12.46□□□□□ -0.41
CLK1P49759 AL021578.1-201ENST00000613646 709 ntBASIC12.46□□□□□ -0.41
CLK1P49759 AC103691.2-201ENST00000618824 433 ntBASIC12.46□□□□□ -0.41
CLK1P49759 AL353726.2-201ENST00000623259 884 ntBASIC12.46□□□□□ -0.41
CLK1P49759 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CLK1P49759 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CLK1P49759 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLK1P49759 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CLK1P49759 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CLK1P49759 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
CLK1P49759 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CLK1P49759 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLK1P49759 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CLK1P49759 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC12.46□□□□□ -0.42
CLK1P49759 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLK1P49759 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms