Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AC006529.1-201ENST00000459978 637 ntBASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AC099548.2-209ENST00000480264 625 ntBASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AC130709.1-201ENST00000484779 1212 ntBASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 VTI1BP1-201ENST00000486325 700 ntBASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 EEF1GP8-201ENST00000506566 1154 ntBASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 AC051619.9-201ENST00000623237 597 ntBASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC12.21□□□□□ -0.45
POLR2J2Q9GZM3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 AC008806.1-201ENST00000624962 2443 ntBASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.21□□□□□ -0.46
POLR2J2Q9GZM3 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 IGHVII-33-1-201ENST00000524010 280 ntBASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AP000322.3-201ENST00000608665 388 ntBASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AC091812.3-201ENST00000621362 345 ntBASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AC120024.4-201ENST00000624285 2143 ntBASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 DBIL5P-203ENST00000536214 2677 ntBASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
POLR2J2Q9GZM3 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms