Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 FOXD2-AS1-201ENST00000445551 2509 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC116049.1-201ENST00000505282 385 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 MAJIN-204ENST00000530444 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TRAPPC2L-214ENST00000568583 801 ntTSL 3 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TSPAN16-206ENST00000621731 642 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ABHD11-AS1-202ENST00000641969 358 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 HSPA8P9-201ENST00000485881 1943 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 C12orf71-201ENST00000429849 957 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AL162386.1-201ENST00000433817 645 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SLC25A5P5-201ENST00000435239 897 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 E2F6P4-201ENST00000468625 514 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC022447.7-201ENST00000509629 435 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ERH-202ENST00000555373 586 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 CLCC1-201ENST00000302500 1316 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS13DQ5THJ4 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AP000346.1-201ENST00000390329 1087 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AL355357.1-203ENST00000402154 639 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 HNRNPA1P24-201ENST00000476029 1046 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 CLDN24-201ENST00000514470 663 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC109635.1-201ENST00000529200 490 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 CLDN24-202ENST00000541814 663 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC012555.1-201ENST00000551650 674 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC091167.7-201ENST00000622269 518 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ILK-216ENST00000627400 111 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ARL6-201ENST00000335979 1630 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ENO4-202ENST00000369207 1484 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC011676.4-201ENST00000523604 413 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 B2M-202ENST00000544417 933 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 DIO3OS-209ENST00000556266 401 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 MAP3K14-AS1-207ENST00000588698 460 ntTSL 4 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 CBR3-AS1-205ENST00000608622 586 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC090826.3-201ENST00000611178 834 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AL035420.3-201ENST00000619647 321 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 WAC-204ENST00000375646 2176 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 ACTG1P18-201ENST00000401561 1143 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 LINC00339-201ENST00000404210 1189 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC211485.1-201ENST00000417100 1107 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 PHBP5-201ENST00000449310 768 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 MIR2110-201ENST00000459421 75 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 AC104066.1-201ENST00000512377 751 ntBASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 SRP19-206ENST00000515463 660 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS13DQ5THJ4 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms