Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 NOS2P3-201ENST00000411468 867 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 NOS2P2-201ENST00000426269 867 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 RN7SL672P-201ENST00000474091 317 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 RN7SL2-201ENST00000490232 300 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 IGLVI-63-201ENST00000524184 384 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 RN7SL4P-201ENST00000584058 295 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AC007450.4-201ENST00000614709 524 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 DDX11L2-201ENST00000437401 1398 ntBASIC17.68■□□□□ 0.42
CGNL1Q0VF96 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGNL1Q0VF96 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 ALOX15P2-201ENST00000340858 1897 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AC120114.4-201ENST00000623731 2194 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AL078621.2-201ENST00000419351 698 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 RN7SL838P-201ENST00000481676 295 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 FKBP4P1-201ENST00000507284 1347 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 PCDHB18P-202ENST00000526308 3197 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 LINC00563-201ENST00000566370 1400 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AC099795.2-201ENST00000639582 440 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 AC138627.1-201ENST00000641127 1257 ntBASIC17.67■□□□□ 0.42
CGNL1Q0VF96 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms