Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 UGT3A1-202ENST00000333811 1114 ntTSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 MRPL51P2-201ENST00000450190 376 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 RN7SL822P-201ENST00000475674 296 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 SCAMP1-AS1-202ENST00000513755 493 ntTSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 SAA2-205ENST00000529528 610 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 IGKV2D-40-202ENST00000560045 312 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC012236.1-201ENST00000560812 680 ntTSL 3 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC131391.1-201ENST00000565359 520 ntTSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AL390726.4-201ENST00000566538 469 ntTSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 LINC02190-201ENST00000567765 568 ntTSL 4 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC008878.1-202ENST00000599312 382 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC007389.1-208ENST00000607539 512 ntTSL 4 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 IGKV2-40-202ENST00000621595 312 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC007191.1-201ENST00000623179 2995 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 FP236240.4-201ENST00000624353 373 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AL021920.1-201ENST00000624517 406 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 HMGB3P4-201ENST00000428776 514 ntBASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 AC006970.1-201ENST00000442064 389 ntBASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 AC124276.1-201ENST00000476130 899 ntTSL 3 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 RN7SL851P-201ENST00000480512 303 ntBASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 RNA5-8SP6-201ENST00000515896 152 ntBASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 AC026826.2-201ENST00000560455 214 ntBASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 AC090398.1-201ENST00000562795 1179 ntBASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 SMCO4P1-201ENST00000592909 177 ntBASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 VPS37A-210ENST00000521829 1307 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RIMBP3Q9UFD9 SLC28A1-202ENST00000338602 1360 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 PSIP1-205ENST00000397519 1664 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 CST4-201ENST00000217423 751 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 USMG5-202ENST00000337003 560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 CATIP-AS2-201ENST00000411433 535 ntTSL 3 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 SOCS2P2-201ENST00000458366 574 ntBASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 RN7SL683P-201ENST00000460552 270 ntBASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 TRPT1-215ENST00000546089 684 ntTSL 3 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 AL035425.1-201ENST00000608811 551 ntTSL 4 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 RNF170-203ENST00000319104 1866 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 FAM90A17P-201ENST00000533716 1957 ntBASIC19.45■□□□□ 0.7
RIMBP3Q9UFD9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 MTRF1LP1-201ENST00000321235 679 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 RNA5SP244-201ENST00000390936 112 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 PRAMEF29P-201ENST00000418187 1139 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 ARSDP1-201ENST00000443820 1215 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 RPSAP22-201ENST00000453567 851 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 RPSAP3-201ENST00000464073 887 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 PSORS1C1-204ENST00000481450 501 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 LHX6-206ENST00000482062 918 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AL732372.3-201ENST00000514436 1239 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AC034205.2-201ENST00000517788 1176 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AP000924.1-201ENST00000526605 720 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 LMO3-211ENST00000534946 1016 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AC027373.1-201ENST00000564694 1142 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms