Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.77□□□□□ -0.21
SLC1A1P43005 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 RPL35P9-201ENST00000446059 350 ntBASIC13.77□□□□□ -0.21
SLC1A1P43005 GNG10P1-201ENST00000452289 199 ntBASIC13.77□□□□□ -0.21
SLC1A1P43005 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC13.77□□□□□ -0.21
SLC1A1P43005 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 KRT8P19-201ENST00000551916 1455 ntBASIC13.77□□□□□ -0.21
SLC1A1P43005 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC1A1P43005 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.77□□□□□ -0.21
SLC1A1P43005 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 POM121L1P-202ENST00000605258 1835 ntBASIC13.77□□□□□ -0.21
SLC1A1P43005 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC1A1P43005 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC1A1P43005 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 MAPK10-262ENST00000641051 5738 ntBASIC13.77□□□□□ -0.21
SLC1A1P43005 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SLC1A1P43005 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.77□□□□□ -0.21
SLC1A1P43005 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 AL606760.3-201ENST00000569869 3591 ntBASIC13.76□□□□□ -0.21
SLC1A1P43005 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC1A1P43005 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC1A1P43005 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC008038.1-201ENST00000634247 1314 ntBASIC13.76□□□□□ -0.21
SLC1A1P43005 OR10N1P-203ENST00000641736 1305 ntBASIC13.76□□□□□ -0.21
SLC1A1P43005 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC1A1P43005 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SLC1A1P43005 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC1A1P43005 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 NOC2LP1-201ENST00000450578 752 ntBASIC13.76□□□□□ -0.21
SLC1A1P43005 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC1A1P43005 NDUFB2P1-201ENST00000506966 295 ntBASIC13.76□□□□□ -0.21
SLC1A1P43005 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC1A1P43005 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SLC1A1P43005 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC002044.2-201ENST00000624910 970 ntBASIC13.76□□□□□ -0.21
SLC1A1P43005 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC1A1P43005 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 MIPEPP1-201ENST00000413533 2027 ntBASIC13.76□□□□□ -0.21
SLC1A1P43005 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC1A1P43005 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC1A1P43005 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC1A1P43005 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms