Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
MTHFRP42898 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
MTHFRP42898 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
MTHFRP42898 CR383656.2-201ENST00000548656 2254 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 PCDHA5-203ENST00000614258 4248 ntBASIC13.75□□□□□ -0.21
MTHFRP42898 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MTHFRP42898 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.75□□□□□ -0.21
MTHFRP42898 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
MTHFRP42898 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 MIR181D-201ENST00000384853 137 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 AC012513.2-201ENST00000441511 1137 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 PRDX3P2-201ENST00000447051 611 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC13.74□□□□□ -0.21
MTHFRP42898 AC012100.1-201ENST00000470304 282 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 RPL10P8-201ENST00000522888 313 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 ALG10-202ENST00000538927 571 ntTSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 MYL6-210ENST00000548400 573 ntTSL 3 BASIC13.74□□□□□ -0.21
MTHFRP42898 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC13.74□□□□□ -0.21
MTHFRP42898 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 PEBP1P1-201ENST00000554856 510 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 AC090825.2-201ENST00000557959 739 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 MED11-203ENST00000575284 652 ntTSL 3 BASIC13.74□□□□□ -0.21
MTHFRP42898 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 AC112702.1-201ENST00000623712 366 ntBASIC13.74□□□□□ -0.21
MTHFRP42898 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
MTHFRP42898 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MTHFRP42898 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC13.74□□□□□ -0.21
MTHFRP42898 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MTHFRP42898 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.74□□□□□ -0.21
MTHFRP42898 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
MTHFRP42898 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MTHFRP42898 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 AL391903.1-201ENST00000407513 365 ntBASIC13.73□□□□□ -0.21
MTHFRP42898 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 AL139317.2-201ENST00000556998 158 ntBASIC13.73□□□□□ -0.21
MTHFRP42898 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC13.73□□□□□ -0.21
MTHFRP42898 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC13.73□□□□□ -0.21
MTHFRP42898 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC13.73□□□□□ -0.21
MTHFRP42898 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MTHFRP42898 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.73□□□□□ -0.21
MTHFRP42898 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
MTHFRP42898 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.73□□□□□ -0.21
MTHFRP42898 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms