Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDC27P30260 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC27P30260 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC27P30260 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC27P30260 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC27P30260 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDC27P30260 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC27P30260 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDC27P30260 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC27P30260 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDC27P30260 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 AC005549.1-201ENST00000579438 1629 ntBASIC15.21■□□□□ 0.03
CDC27P30260 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 AC138969.2-201ENST00000532739 9932 ntBASIC15.21■□□□□ 0.03
CDC27P30260 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC27P30260 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDC27P30260 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDC27P30260 MIR566-201ENST00000385187 94 ntBASIC15.21■□□□□ 0.03
CDC27P30260 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC27P30260 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC27P30260 DEFA8P-201ENST00000457582 285 ntBASIC15.21■□□□□ 0.03
CDC27P30260 RPL7AP53-201ENST00000468834 793 ntBASIC15.21■□□□□ 0.03
CDC27P30260 RN7SL789P-201ENST00000478944 293 ntBASIC15.21■□□□□ 0.03
CDC27P30260 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.21■□□□□ 0.03
CDC27P30260 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CDC27P30260 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC27P30260 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC27P30260 AC010202.1-201ENST00000551181 405 ntBASIC15.21■□□□□ 0.03
CDC27P30260 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC27P30260 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC27P30260 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.21■□□□□ 0.03
CDC27P30260 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC27P30260 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC27P30260 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC27P30260 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC27P30260 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC27P30260 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC27P30260 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDC27P30260 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDC27P30260 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC27P30260 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC27P30260 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC15.21■□□□□ 0.02
CDC27P30260 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC27P30260 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
CDC27P30260 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.2■□□□□ 0.02
CDC27P30260 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC27P30260 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDC27P30260 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
CDC27P30260 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC27P30260 RNA5SP84-201ENST00000364740 107 ntBASIC15.2■□□□□ 0.02
CDC27P30260 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC27P30260 IFNWP2-201ENST00000431203 580 ntBASIC15.2■□□□□ 0.02
CDC27P30260 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC27P30260 VENTXP4-201ENST00000449029 958 ntBASIC15.2■□□□□ 0.02
CDC27P30260 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC15.2■□□□□ 0.02
CDC27P30260 AC026470.1-201ENST00000478038 846 ntBASIC15.2■□□□□ 0.02
CDC27P30260 CDK2AP2P2-201ENST00000478512 367 ntBASIC15.2■□□□□ 0.02
CDC27P30260 AADAC-202ENST00000488869 719 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC27P30260 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.2■□□□□ 0.02
CDC27P30260 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC27P30260 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC27P30260 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC27P30260 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC27P30260 RN7SL678P-201ENST00000579533 299 ntBASIC15.2■□□□□ 0.02
CDC27P30260 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDC27P30260 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CDC27P30260 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC27P30260 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDC27P30260 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC27P30260 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms