Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 AL031587.5-201ENST00000624344 1849 ntBASIC11.78□□□□□ -0.52
APOC1P02654 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC1P02654 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC11.78□□□□□ -0.52
APOC1P02654 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
APOC1P02654 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.78□□□□□ -0.52
APOC1P02654 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC1P02654 AP003969.2-201ENST00000623739 2275 ntBASIC11.77□□□□□ -0.52
APOC1P02654 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC1P02654 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
APOC1P02654 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
APOC1P02654 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
APOC1P02654 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC1P02654 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC1P02654 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
APOC1P02654 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.77□□□□□ -0.53
APOC1P02654 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
APOC1P02654 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 CELP-201ENST00000411440 1249 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC11.77□□□□□ -0.53
APOC1P02654 AC103563.1-201ENST00000429316 123 ntBASIC11.77□□□□□ -0.53
APOC1P02654 AC244107.1-201ENST00000442033 332 ntBASIC11.77□□□□□ -0.53
APOC1P02654 AC234782.1-201ENST00000451950 919 ntBASIC11.77□□□□□ -0.53
APOC1P02654 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC11.77□□□□□ -0.53
APOC1P02654 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC11.77□□□□□ -0.53
APOC1P02654 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC11.77□□□□□ -0.53
APOC1P02654 IGLV3-15-201ENST00000518356 244 ntBASIC11.77□□□□□ -0.53
APOC1P02654 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 IQSEC3P1-201ENST00000538799 536 ntBASIC11.77□□□□□ -0.53
APOC1P02654 AL132994.1-201ENST00000554098 400 ntBASIC11.77□□□□□ -0.53
APOC1P02654 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC11.77□□□□□ -0.53
APOC1P02654 MT3-203ENST00000565838 421 ntTSL 3 BASIC11.77□□□□□ -0.53
APOC1P02654 AC005632.3-201ENST00000605544 308 ntBASIC11.77□□□□□ -0.53
APOC1P02654 AC103810.10-201ENST00000606504 343 ntBASIC11.77□□□□□ -0.53
APOC1P02654 AC051619.9-201ENST00000623237 597 ntBASIC11.77□□□□□ -0.53
APOC1P02654 CMC2-224ENST00000630396 481 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.77□□□□□ -0.53
APOC1P02654 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC1P02654 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
APOC1P02654 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC1P02654 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.77□□□□□ -0.53
APOC1P02654 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.77□□□□□ -0.53
APOC1P02654 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
APOC1P02654 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC1P02654 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC1P02654 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC11.76□□□□□ -0.53
APOC1P02654 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 AC006144.1-201ENST00000424220 1600 ntBASIC11.76□□□□□ -0.53
APOC1P02654 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC1P02654 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 RNVU1-8-201ENST00000364272 125 ntBASIC11.76□□□□□ -0.53
APOC1P02654 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC1P02654 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC11.76□□□□□ -0.53
APOC1P02654 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC1P02654 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms