Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC091181.1-201ENST00000623762 2098 ntBASIC11.81□□□□□ -0.52
ZIC3O60481 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.81□□□□□ -0.52
ZIC3O60481 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ZIC3O60481 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
ZIC3O60481 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
ZIC3O60481 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.8□□□□□ -0.52
ZIC3O60481 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 PCDHB18P-202ENST00000526308 3197 ntBASIC11.8□□□□□ -0.52
ZIC3O60481 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.8□□□□□ -0.52
ZIC3O60481 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ZIC3O60481 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC11.8□□□□□ -0.52
ZIC3O60481 PRADC1P1-201ENST00000412317 525 ntBASIC11.8□□□□□ -0.52
ZIC3O60481 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC11.8□□□□□ -0.52
ZIC3O60481 AP000533.1-201ENST00000456143 1177 ntBASIC11.8□□□□□ -0.52
ZIC3O60481 GYG1-209ENST00000483267 801 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC11.8□□□□□ -0.52
ZIC3O60481 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC11.8□□□□□ -0.52
ZIC3O60481 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC11.8□□□□□ -0.52
ZIC3O60481 RN7SL678P-201ENST00000579533 299 ntBASIC11.8□□□□□ -0.52
ZIC3O60481 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC11.8□□□□□ -0.52
ZIC3O60481 AC009118.3-201ENST00000622896 873 ntBASIC11.8□□□□□ -0.52
ZIC3O60481 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
ZIC3O60481 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.8□□□□□ -0.52
ZIC3O60481 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC11.8□□□□□ -0.52
ZIC3O60481 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ZIC3O60481 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ZIC3O60481 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ZIC3O60481 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC11.8□□□□□ -0.52
ZIC3O60481 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ZIC3O60481 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC11.79□□□□□ -0.52
ZIC3O60481 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC11.79□□□□□ -0.52
ZIC3O60481 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.79□□□□□ -0.52
ZIC3O60481 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ZIC3O60481 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
ZIC3O60481 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
ZIC3O60481 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.79□□□□□ -0.52
ZIC3O60481 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ZIC3O60481 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms