Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CHMP4BP1-201ENST00000556017 588 ntBASIC12.54□□□□□ -0.4
CLK1P49759 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.54□□□□□ -0.4
CLK1P49759 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.54□□□□□ -0.4
CLK1P49759 MIR4326-201ENST00000582203 59 ntBASIC12.54□□□□□ -0.4
CLK1P49759 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLK1P49759 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLK1P49759 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
CLK1P49759 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CLK1P49759 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.54□□□□□ -0.4
CLK1P49759 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLK1P49759 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.54□□□□□ -0.4
CLK1P49759 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLK1P49759 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CLK1P49759 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLK1P49759 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 AC010536.1-201ENST00000538868 2611 ntBASIC12.53□□□□□ -0.4
CLK1P49759 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CLK1P49759 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
CLK1P49759 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 CEP164P1-201ENST00000455142 418 ntBASIC12.53□□□□□ -0.4
CLK1P49759 CHCHD2P9-201ENST00000461726 456 ntBASIC12.53□□□□□ -0.4
CLK1P49759 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.53□□□□□ -0.4
CLK1P49759 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.53□□□□□ -0.4
CLK1P49759 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.53□□□□□ -0.4
CLK1P49759 FGFR3P5-201ENST00000564496 886 ntBASIC12.53□□□□□ -0.4
CLK1P49759 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 AP001462.1-201ENST00000594089 452 ntBASIC12.53□□□□□ -0.4
CLK1P49759 AL049840.2-201ENST00000602722 535 ntBASIC12.53□□□□□ -0.4
CLK1P49759 AC103810.10-201ENST00000606504 343 ntBASIC12.53□□□□□ -0.4
CLK1P49759 AC051619.9-201ENST00000623237 597 ntBASIC12.53□□□□□ -0.4
CLK1P49759 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 IL9RP3-201ENST00000442856 1674 ntBASIC12.53□□□□□ -0.4
CLK1P49759 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 PES1P2-201ENST00000449745 1735 ntBASIC12.53□□□□□ -0.4
CLK1P49759 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 Z98885.3-201ENST00000624882 1757 ntBASIC12.53□□□□□ -0.4
CLK1P49759 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLK1P49759 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
CLK1P49759 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
CLK1P49759 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLK1P49759 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.52□□□□□ -0.4
CLK1P49759 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.52□□□□□ -0.4
CLK1P49759 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.52□□□□□ -0.4
CLK1P49759 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.52□□□□□ -0.4
CLK1P49759 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
CLK1P49759 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLK1P49759 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLK1P49759 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLK1P49759 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLK1P49759 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLK1P49759 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.52□□□□□ -0.41
CLK1P49759 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLK1P49759 OR2W2P-201ENST00000406313 909 ntBASIC12.52□□□□□ -0.41
CLK1P49759 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLK1P49759 ERP29P1-201ENST00000442902 706 ntBASIC12.52□□□□□ -0.41
CLK1P49759 UPF3AP2-201ENST00000457924 1132 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms