Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.06□□□□□ -0.48
P04436 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC12.06□□□□□ -0.48
P04436 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.06□□□□□ -0.48
P04436 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
P04436 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 BEND3P3-201ENST00000611030 2440 ntBASIC12.06□□□□□ -0.48
P04436 AC139491.6-202ENST00000637171 2077 ntBASIC12.06□□□□□ -0.48
P04436 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04436 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04436 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.05□□□□□ -0.48
P04436 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P04436 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
P04436 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.05□□□□□ -0.48
P04436 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
P04436 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC12.05□□□□□ -0.48
P04436 AL606760.3-201ENST00000569869 3591 ntBASIC12.05□□□□□ -0.48
P04436 AC020658.7-201ENST00000624274 2442 ntBASIC12.05□□□□□ -0.48
P04436 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
P04436 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC12.05□□□□□ -0.48
P04436 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
P04436 YBX1P3-201ENST00000468366 909 ntBASIC12.05□□□□□ -0.48
P04436 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC12.05□□□□□ -0.48
P04436 AC120498.7-201ENST00000562876 330 ntBASIC12.05□□□□□ -0.48
P04436 RPSAP67-201ENST00000584105 862 ntBASIC12.05□□□□□ -0.48
P04436 AC136475.7-201ENST00000602949 592 ntBASIC12.05□□□□□ -0.48
P04436 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.05□□□□□ -0.48
P04436 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04436 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04436 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.05□□□□□ -0.48
P04436 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.05□□□□□ -0.48
P04436 AL450468.2-201ENST00000565955 1889 ntBASIC12.05□□□□□ -0.48
P04436 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 AL137784.3-201ENST00000623858 2288 ntBASIC12.05□□□□□ -0.48
P04436 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P04436 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04436 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.05□□□□□ -0.48
P04436 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04436 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P04436 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.05□□□□□ -0.48
P04436 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04436 MIPEPP1-201ENST00000413533 2027 ntBASIC12.04□□□□□ -0.48
P04436 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.04□□□□□ -0.48
P04436 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
P04436 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
P04436 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC12.04□□□□□ -0.48
P04436 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
P04436 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
P04436 RNA5SP248-201ENST00000365602 127 ntBASIC12.04□□□□□ -0.48
P04436 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC12.04□□□□□ -0.48
P04436 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
P04436 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
P04436 SSR4P1-201ENST00000415143 412 ntBASIC12.04□□□□□ -0.48
P04436 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC12.04□□□□□ -0.48
P04436 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC12.04□□□□□ -0.48
P04436 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.04□□□□□ -0.48
P04436 BMF-206ENST00000558774 671 ntTSL 3 BASIC12.04□□□□□ -0.48
P04436 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.04□□□□□ -0.48
P04436 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms