Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 RN7SL494P-201ENST00000461517 304 ntBASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 CTBP2P4-201ENST00000513884 920 ntBASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 GOLGA2P10-201ENST00000550961 817 ntBASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 AC092978.1-202ENST00000637590 1327 ntBASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 AC005549.1-201ENST00000579438 1629 ntBASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 AC015819.3-201ENST00000624305 2674 ntBASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB9F8W1W9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 PCDHB17P-202ENST00000623466 3066 ntBASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NPIPB9F8W1W9 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 SIRPB3P-201ENST00000340424 1216 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 GEMIN8P4-201ENST00000380526 729 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AQP7P5-201ENST00000428759 1049 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AQP7P4-201ENST00000447083 1042 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AL049597.1-201ENST00000447415 555 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AQP7P2-201ENST00000453967 1041 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 DEFA8P-201ENST00000457582 285 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 RN7SL396P-201ENST00000471086 295 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 RN7SL147P-201ENST00000487345 298 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 MIR5572-201ENST00000583188 137 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 TLE2-205ENST00000586422 389 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AQP7P3-201ENST00000624547 1041 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 AL109809.1-201ENST00000418979 1367 ntBASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NPIPB9F8W1W9 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPB9F8W1W9 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPB9F8W1W9 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPB9F8W1W9 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPB9F8W1W9 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms