Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC117503.4-201ENST00000623229 1418 ntBASIC11.81□□□□□ -0.52
APOC1P02654 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC11.81□□□□□ -0.52
APOC1P02654 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 OR52M2P-201ENST00000414298 959 ntBASIC11.81□□□□□ -0.52
APOC1P02654 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC11.81□□□□□ -0.52
APOC1P02654 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC11.81□□□□□ -0.52
APOC1P02654 STK24P1-201ENST00000455035 1291 ntBASIC11.81□□□□□ -0.52
APOC1P02654 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC11.81□□□□□ -0.52
APOC1P02654 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC11.81□□□□□ -0.52
APOC1P02654 AC100858.1-201ENST00000514059 1228 ntBASIC11.81□□□□□ -0.52
APOC1P02654 AC245884.6-201ENST00000515672 1067 ntBASIC11.81□□□□□ -0.52
APOC1P02654 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC11.81□□□□□ -0.52
APOC1P02654 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC11.81□□□□□ -0.52
APOC1P02654 HERC2P11-201ENST00000562845 725 ntBASIC11.81□□□□□ -0.52
APOC1P02654 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 AC100756.2-201ENST00000569537 736 ntBASIC11.81□□□□□ -0.52
APOC1P02654 NAA38-204ENST00000575208 529 ntTSL 3 BASIC11.81□□□□□ -0.52
APOC1P02654 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.81□□□□□ -0.52
APOC1P02654 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC11.81□□□□□ -0.52
APOC1P02654 AC011491.1-203ENST00000637688 543 ntBASIC11.81□□□□□ -0.52
APOC1P02654 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
APOC1P02654 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 DDC-206ENST00000431062 1620 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
APOC1P02654 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 HLA-DMA-203ENST00000395305 777 ntBASIC11.8□□□□□ -0.52
APOC1P02654 AL662890.1-201ENST00000396818 632 ntBASIC11.8□□□□□ -0.52
APOC1P02654 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC1P02654 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC1P02654 ORAOV1P1-201ENST00000503108 395 ntBASIC11.8□□□□□ -0.52
APOC1P02654 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC1P02654 FAM213AP2-201ENST00000521579 683 ntBASIC11.8□□□□□ -0.52
APOC1P02654 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 CD44-224ENST00000526669 870 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 PIGCP1-201ENST00000527583 895 ntBASIC11.8□□□□□ -0.52
APOC1P02654 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC11.8□□□□□ -0.52
APOC1P02654 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC1P02654 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
APOC1P02654 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC1P02654 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC11.8□□□□□ -0.52
APOC1P02654 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 AC091812.3-201ENST00000621362 345 ntBASIC11.8□□□□□ -0.52
APOC1P02654 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 CA6-205ENST00000480186 1493 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOC1P02654 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC1P02654 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
APOC1P02654 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms