Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AL845472.1-202ENST00000624675 4080 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AL645937.6-201ENST00000641122 3727 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC025271.4-201ENST00000621477 1726 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 PCDHB18P-202ENST00000526308 3197 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 BX324167.2-201ENST00000623717 3316 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 TPI1P3-201ENST00000335020 740 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 OR7E155P-201ENST00000412208 1014 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 NALT1-202ENST00000450304 437 ntTSL 3 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 PIN4P1-201ENST00000451079 396 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AL137779.3-201ENST00000553295 729 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AL359219.1-201ENST00000556311 934 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AP001120.3-201ENST00000585729 489 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 GBAP1-208ENST00000566701 1546 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 AC007336.3-201ENST00000623886 2160 ntBASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PARPBPQ9NWS1 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 EGLN3-205ENST00000547327 2849 ntBASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 AC010970.1-201ENST00000445125 1848 ntBASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 SRL-202ENST00000537996 1814 ntTSL 2 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 OR2T32P-201ENST00000403423 963 ntBASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 SDCBP2P1-201ENST00000416115 614 ntBASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC11.93□□□□□ -0.5
PARPBPQ9NWS1 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms