Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 RNA5SP288-201ENST00000516075 93 ntBASIC17.79■□□□□ 0.44
CGNL1Q0VF96 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 HLF-202ENST00000430986 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 DLX4-206ENST00000611342 1662 ntBASIC17.79■□□□□ 0.44
CGNL1Q0VF96 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 AGGF1P10-201ENST00000635005 2191 ntBASIC17.79■□□□□ 0.44
CGNL1Q0VF96 AL356585.2-201ENST00000625078 2396 ntBASIC17.79■□□□□ 0.44
CGNL1Q0VF96 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CGNL1Q0VF96 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 MIR339-201ENST00000362153 94 ntBASIC17.78■□□□□ 0.44
CGNL1Q0VF96 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AC026412.1-206ENST00000502273 206 ntBASIC17.78■□□□□ 0.44
CGNL1Q0VF96 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 CTBP2P6-201ENST00000526402 1229 ntBASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 CR392039.1-201ENST00000623217 204 ntBASIC17.78■□□□□ 0.44
CGNL1Q0VF96 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
CGNL1Q0VF96 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 AL353622.2-201ENST00000605846 425 ntBASIC17.77■□□□□ 0.44
CGNL1Q0VF96 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC17.77■□□□□ 0.44
CGNL1Q0VF96 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.77■□□□□ 0.44
CGNL1Q0VF96 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 PABPC1P2-201ENST00000471997 1805 ntBASIC17.77■□□□□ 0.43
CGNL1Q0VF96 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CGNL1Q0VF96 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms