Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HRH3Q9Y5N1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
HRH3Q9Y5N1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.33■□□□□ 0.84
HRH3Q9Y5N1 AC092068.2-201ENST00000590491 1708 ntBASIC20.33■□□□□ 0.84
HRH3Q9Y5N1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HRH3Q9Y5N1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 AC008764.7-201ENST00000593779 1081 ntBASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 AC011298.3-201ENST00000615796 283 ntBASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 RASA4CP-201ENST00000424092 1398 ntBASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HRH3Q9Y5N1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 LINC01529-204ENST00000636474 1715 ntBASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 AL138724.1-201ENST00000606771 1088 ntBASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.31■□□□□ 0.84
HRH3Q9Y5N1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.3■□□□□ 0.84
HRH3Q9Y5N1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 FP325331.1-202ENST00000623531 1380 ntBASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
HRH3Q9Y5N1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 AL499627.2-201ENST00000606283 725 ntBASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HRH3Q9Y5N1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 AC099791.1-201ENST00000416440 715 ntBASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HRH3Q9Y5N1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HRH3Q9Y5N1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
HRH3Q9Y5N1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 AC027682.1-201ENST00000562846 899 ntBASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 MIR5787-201ENST00000611784 55 ntBASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 MIR6821-201ENST00000617625 74 ntBASIC20.26■□□□□ 0.83
HRH3Q9Y5N1 AC136469.2-201ENST00000623944 1028 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms