Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHB1Q9Y5F3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 AC099791.2-201ENST00000605725 427 ntBASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB1Q9Y5F3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB1Q9Y5F3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB1Q9Y5F3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHB1Q9Y5F3 AC027682.1-201ENST00000562846 899 ntBASIC22.03■■□□□ 1.12
PCDHB1Q9Y5F3 AC008764.7-201ENST00000593779 1081 ntBASIC22.03■■□□□ 1.12
PCDHB1Q9Y5F3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB1Q9Y5F3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB1Q9Y5F3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PCDHB1Q9Y5F3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHB1Q9Y5F3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHB1Q9Y5F3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
PCDHB1Q9Y5F3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB1Q9Y5F3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB1Q9Y5F3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHB1Q9Y5F3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHB1Q9Y5F3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
PCDHB1Q9Y5F3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHB1Q9Y5F3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHB1Q9Y5F3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 AC009086.3-201ENST00000623486 1008 ntBASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB1Q9Y5F3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 AC133561.1-201ENST00000568600 2415 ntBASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB1Q9Y5F3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 IRS3P-201ENST00000223076 1006 ntBASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 AC099791.1-201ENST00000416440 715 ntBASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB1Q9Y5F3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 AC011298.3-201ENST00000615796 283 ntBASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 AC241377.3-202ENST00000626088 1088 ntBASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 AC241585.3-202ENST00000628937 1088 ntBASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 AC245100.8-202ENST00000629247 1058 ntBASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB1Q9Y5F3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHB1Q9Y5F3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms