Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 AC136469.2-201ENST00000623944 1028 ntBASIC21.58■■□□□ 1.05
PCDHB11Q9Y5F2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHB11Q9Y5F2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHB11Q9Y5F2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB11Q9Y5F2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB11Q9Y5F2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB11Q9Y5F2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 DUX4L4-201ENST00000566884 1269 ntBASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB11Q9Y5F2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 AL353803.4-201ENST00000565882 1934 ntBASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB11Q9Y5F2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB11Q9Y5F2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDHB11Q9Y5F2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 AC233992.3-201ENST00000607491 485 ntBASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB11Q9Y5F2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 AC006455.2-201ENST00000429931 906 ntBASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDHB11Q9Y5F2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHB11Q9Y5F2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 MIR3181-201ENST00000578512 73 ntBASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms