Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.98■□□□□ 0.63
MRPS28Q9Y2Q9 AC087742.1-201ENST00000575880 1738 ntBASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.97■□□□□ 0.63
MRPS28Q9Y2Q9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MRPS28Q9Y2Q9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 KRT8P33-201ENST00000508125 1423 ntBASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 YBX1P4-201ENST00000392794 808 ntBASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 AC007375.3-201ENST00000600936 2314 ntBASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPS28Q9Y2Q9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 LINC01529-204ENST00000636474 1715 ntBASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 AC103834.1-201ENST00000520383 144 ntBASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 AC103724.3-201ENST00000564481 992 ntBASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 AC012354.3-201ENST00000623734 483 ntBASIC18.94■□□□□ 0.62
MRPS28Q9Y2Q9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MRPS28Q9Y2Q9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.93■□□□□ 0.62
MRPS28Q9Y2Q9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.93■□□□□ 0.62
MRPS28Q9Y2Q9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
MRPS28Q9Y2Q9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPS28Q9Y2Q9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPS28Q9Y2Q9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPS28Q9Y2Q9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPS28Q9Y2Q9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.92■□□□□ 0.62
MRPS28Q9Y2Q9 AC137630.3-201ENST00000607245 391 ntBASIC18.92■□□□□ 0.62
MRPS28Q9Y2Q9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPS28Q9Y2Q9 AC005703.6-201ENST00000623265 1329 ntBASIC18.92■□□□□ 0.62
MRPS28Q9Y2Q9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.92■□□□□ 0.62
MRPS28Q9Y2Q9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MRPS28Q9Y2Q9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 AL033527.3-201ENST00000566366 1196 ntBASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPS28Q9Y2Q9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.9■□□□□ 0.62
MRPS28Q9Y2Q9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms