Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 SLC6A10P-202ENST00000431994 2058 ntBASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H4Q9UPT8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.92
ZC3H4Q9UPT8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.01■■□□□ 1.92
ZC3H4Q9UPT8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 POU5F1P3-201ENST00000428824 1078 ntBASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 AC005181.1-201ENST00000604782 1256 ntBASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
ZC3H4Q9UPT8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27■■□□□ 1.91
ZC3H4Q9UPT8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27■■□□□ 1.91
ZC3H4Q9UPT8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H4Q9UPT8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H4Q9UPT8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H4Q9UPT8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H4Q9UPT8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
ZC3H4Q9UPT8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.99■■□□□ 1.91
ZC3H4Q9UPT8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H4Q9UPT8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H4Q9UPT8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.99■■□□□ 1.91
ZC3H4Q9UPT8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H4Q9UPT8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H4Q9UPT8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.98■■□□□ 1.91
ZC3H4Q9UPT8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.98■■□□□ 1.91
ZC3H4Q9UPT8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.98■■□□□ 1.91
ZC3H4Q9UPT8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ZC3H4Q9UPT8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.98■■□□□ 1.91
ZC3H4Q9UPT8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.98■■□□□ 1.91
ZC3H4Q9UPT8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 AC007322.1-201ENST00000426983 750 ntBASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3H4Q9UPT8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
ZC3H4Q9UPT8 DUX4L16-201ENST00000555130 1264 ntBASIC26.96■■□□□ 1.91
ZC3H4Q9UPT8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZC3H4Q9UPT8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.96■■□□□ 1.91
ZC3H4Q9UPT8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.96■■□□□ 1.91
ZC3H4Q9UPT8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.95■■□□□ 1.91
ZC3H4Q9UPT8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.91
ZC3H4Q9UPT8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.95■■□□□ 1.91
ZC3H4Q9UPT8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.95■■□□□ 1.91
ZC3H4Q9UPT8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZC3H4Q9UPT8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZC3H4Q9UPT8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZC3H4Q9UPT8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 AC087239.1-201ENST00000622671 572 ntBASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
ZC3H4Q9UPT8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 AC079140.4-201ENST00000507448 529 ntBASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZC3H4Q9UPT8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 KRT18P29-201ENST00000397031 1267 ntBASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
ZC3H4Q9UPT8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms