Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 AC105233.4-201ENST00000642045 216 ntBASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SYNPO2Q9UMS6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 AC010141.3-201ENST00000456659 717 ntBASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SYNPO2Q9UMS6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SYNPO2Q9UMS6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.64■■□□□ 1.69
SYNPO2Q9UMS6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SYNPO2Q9UMS6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SYNPO2Q9UMS6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.63■■□□□ 1.69
SYNPO2Q9UMS6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 LINC02228-203ENST00000641970 1355 ntBASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 MIR6084-201ENST00000622012 110 ntBASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SYNPO2Q9UMS6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 TERF1P2-201ENST00000583350 1212 ntBASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 AC092666.2-201ENST00000613287 246 ntBASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SYNPO2Q9UMS6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SYNPO2Q9UMS6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4L2-201ENST00000561772 1275 ntBASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4L6-201ENST00000626483 1275 ntBASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4L1-201ENST00000627662 1275 ntBASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4L8-201ENST00000629013 1275 ntBASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4L3-201ENST00000630187 1275 ntBASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4L7-201ENST00000630678 1275 ntBASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 DUX4L5-201ENST00000630834 1275 ntBASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SYNPO2Q9UMS6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
SYNPO2Q9UMS6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.58■■□□□ 1.69
SYNPO2Q9UMS6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.58■■□□□ 1.69
SYNPO2Q9UMS6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.58■■□□□ 1.69
SYNPO2Q9UMS6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.58■■□□□ 1.69
SYNPO2Q9UMS6 OXCT2P1-201ENST00000447263 1535 ntBASIC25.58■■□□□ 1.68
SYNPO2Q9UMS6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 CCDC92B-201ENST00000575506 885 ntBASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SYNPO2Q9UMS6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms