Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CDCA4P2-201ENST00000441182 718 ntBASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NOTCH3Q9UM47 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 AL161729.1-201ENST00000604104 1402 ntBASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NOTCH3Q9UM47 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NOTCH3Q9UM47 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.89■□□□□ 0.3
NOTCH3Q9UM47 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NOTCH3Q9UM47 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NOTCH3Q9UM47 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms