Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HCFC1R1Q9NWW0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.14■■□□□ 1.3
HCFC1R1Q9NWW0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.14■■□□□ 1.3
HCFC1R1Q9NWW0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
HCFC1R1Q9NWW0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC1R1Q9NWW0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC1R1Q9NWW0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.14■■□□□ 1.29
HCFC1R1Q9NWW0 LINC00543-201ENST00000567234 1845 ntBASIC23.14■■□□□ 1.29
HCFC1R1Q9NWW0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.13■■□□□ 1.29
HCFC1R1Q9NWW0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HCFC1R1Q9NWW0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
HCFC1R1Q9NWW0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.12■■□□□ 1.29
HCFC1R1Q9NWW0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.12■■□□□ 1.29
HCFC1R1Q9NWW0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.12■■□□□ 1.29
HCFC1R1Q9NWW0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HCFC1R1Q9NWW0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC1R1Q9NWW0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC1R1Q9NWW0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
HCFC1R1Q9NWW0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC1R1Q9NWW0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC1R1Q9NWW0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
HCFC1R1Q9NWW0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 TPRG1LP1-201ENST00000598702 760 ntBASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HCFC1R1Q9NWW0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC1R1Q9NWW0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 AL353803.4-201ENST00000565882 1934 ntBASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC1R1Q9NWW0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HCFC1R1Q9NWW0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
HCFC1R1Q9NWW0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.08■■□□□ 1.28
HCFC1R1Q9NWW0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
HCFC1R1Q9NWW0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 AL139125.2-201ENST00000623134 1869 ntBASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 ID1-201ENST00000376105 1233 ntBASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.07■■□□□ 1.28
HCFC1R1Q9NWW0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
HCFC1R1Q9NWW0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms