Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 AL139246.5-201ENST00000606645 996 ntBASIC25.66■■□□□ 1.7
RBM28Q9NW13 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
RBM28Q9NW13 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RBM28Q9NW13 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
RBM28Q9NW13 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RBM28Q9NW13 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.65■■□□□ 1.7
RBM28Q9NW13 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RBM28Q9NW13 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
RBM28Q9NW13 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.65■■□□□ 1.7
RBM28Q9NW13 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.65■■□□□ 1.7
RBM28Q9NW13 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RBM28Q9NW13 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RBM28Q9NW13 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.64■■□□□ 1.7
RBM28Q9NW13 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
RBM28Q9NW13 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.7
RBM28Q9NW13 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.64■■□□□ 1.7
RBM28Q9NW13 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.64■■□□□ 1.7
RBM28Q9NW13 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.64■■□□□ 1.69
RBM28Q9NW13 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
RBM28Q9NW13 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RBM28Q9NW13 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RBM28Q9NW13 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.63■■□□□ 1.69
RBM28Q9NW13 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
RBM28Q9NW13 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.63■■□□□ 1.69
RBM28Q9NW13 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
RBM28Q9NW13 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.63■■□□□ 1.69
RBM28Q9NW13 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.63■■□□□ 1.69
RBM28Q9NW13 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.63■■□□□ 1.69
RBM28Q9NW13 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 AC068473.5-201ENST00000616428 2072 ntBASIC25.62■■□□□ 1.69
RBM28Q9NW13 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RBM28Q9NW13 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.62■■□□□ 1.69
RBM28Q9NW13 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RBM28Q9NW13 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RBM28Q9NW13 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RBM28Q9NW13 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.61■■□□□ 1.69
RBM28Q9NW13 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RBM28Q9NW13 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.61■■□□□ 1.69
RBM28Q9NW13 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RBM28Q9NW13 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
RBM28Q9NW13 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RBM28Q9NW13 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RBM28Q9NW13 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.6■■□□□ 1.69
RBM28Q9NW13 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RBM28Q9NW13 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RBM28Q9NW13 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
RBM28Q9NW13 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RBM28Q9NW13 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.6■■□□□ 1.69
RBM28Q9NW13 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.6■■□□□ 1.69
RBM28Q9NW13 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RBM28Q9NW13 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RBM28Q9NW13 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RBM28Q9NW13 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RBM28Q9NW13 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RBM28Q9NW13 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.59■■□□□ 1.69
RBM28Q9NW13 AC133561.4-201ENST00000566112 224 ntBASIC25.59■■□□□ 1.69
RBM28Q9NW13 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RBM28Q9NW13 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RBM28Q9NW13 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.59■■□□□ 1.69
RBM28Q9NW13 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RBM28Q9NW13 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.58■■□□□ 1.69
RBM28Q9NW13 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RBM28Q9NW13 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RBM28Q9NW13 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RBM28Q9NW13 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
RBM28Q9NW13 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RBM28Q9NW13 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RBM28Q9NW13 EDA-201ENST00000338901 1233 ntBASIC25.58■■□□□ 1.69
RBM28Q9NW13 SLC47A1P1-202ENST00000449666 945 ntBASIC25.58■■□□□ 1.69
RBM28Q9NW13 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.58■■□□□ 1.69
RBM28Q9NW13 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.58■■□□□ 1.69
RBM28Q9NW13 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.58■■□□□ 1.69
RBM28Q9NW13 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RBM28Q9NW13 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.58■■□□□ 1.69
RBM28Q9NW13 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.58■■□□□ 1.69
RBM28Q9NW13 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RBM28Q9NW13 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
RBM28Q9NW13 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
RBM28Q9NW13 LINC01960-201ENST00000563759 1884 ntBASIC25.57■■□□□ 1.68
RBM28Q9NW13 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RBM28Q9NW13 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RBM28Q9NW13 BX842568.3-201ENST00000418104 571 ntBASIC25.57■■□□□ 1.68
RBM28Q9NW13 AC010525.1-201ENST00000585559 441 ntBASIC25.57■■□□□ 1.68
RBM28Q9NW13 AL031602.1-201ENST00000633169 911 ntBASIC25.57■■□□□ 1.68
RBM28Q9NW13 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RBM28Q9NW13 C1orf229-201ENST00000623686 2258 ntBASIC25.57■■□□□ 1.68
RBM28Q9NW13 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
RBM28Q9NW13 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.56■■□□□ 1.68
RBM28Q9NW13 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RBM28Q9NW13 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RBM28Q9NW13 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms