Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN7CQ9NUP9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 AL353803.4-201ENST00000565882 1934 ntBASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 MTDHP2-201ENST00000601468 714 ntBASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LIN7CQ9NUP9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LIN7CQ9NUP9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LIN7CQ9NUP9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LIN7CQ9NUP9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LIN7CQ9NUP9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN7CQ9NUP9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 TSPY9P-201ENST00000440215 945 ntBASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 TSPY11P-201ENST00000442607 1045 ntBASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 MIR6722-201ENST00000617286 78 ntBASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LIN7CQ9NUP9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LIN7CQ9NUP9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 UNC93B8-201ENST00000511903 705 ntBASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 AC010997.5-201ENST00000609182 354 ntBASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms