Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 LTB4R2-202ENST00000528054 3092 ntBASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE1Q9NRR8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE1Q9NRR8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CDC42SE1Q9NRR8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 AC005082.1-201ENST00000413042 2259 ntBASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE1Q9NRR8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 BX323043.1-201ENST00000641006 1765 ntBASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 NOC2LP1-202ENST00000452600 2235 ntBASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 AC018445.3-201ENST00000624177 1945 ntBASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 C11orf96-202ENST00000528572 1834 ntBASIC11.42□□□□□ -0.58
CDC42SE1Q9NRR8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms