Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB16Q9NRJ7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 GUSBP5-202ENST00000510805 1989 ntBASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB16Q9NRJ7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHB16Q9NRJ7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 AC127496.7-201ENST00000625110 1798 ntBASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB16Q9NRJ7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 ECEL1P1-201ENST00000373592 1742 ntBASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 AL353803.4-201ENST00000565882 1934 ntBASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 AC137767.1-201ENST00000602918 1920 ntBASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB16Q9NRJ7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB16Q9NRJ7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 SNX5-217ENST00000606557 1087 ntBASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 AC137630.3-201ENST00000607245 391 ntBASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 AC144652.1-201ENST00000609974 1624 ntBASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 AC092667.1-201ENST00000434301 2586 ntBASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB16Q9NRJ7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 AC242852.2-201ENST00000615738 1807 ntBASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 LINC00526-201ENST00000581067 1875 ntBASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms