Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 AC136469.2-201ENST00000623944 1028 ntBASIC18.78■□□□□ 0.6
GCM1Q9NP62 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 AC133637.1-201ENST00000624115 1537 ntBASIC18.78■□□□□ 0.6
GCM1Q9NP62 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
GCM1Q9NP62 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GCM1Q9NP62 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 AC133561.4-201ENST00000566112 224 ntBASIC18.77■□□□□ 0.6
GCM1Q9NP62 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
GCM1Q9NP62 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GCM1Q9NP62 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GCM1Q9NP62 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GCM1Q9NP62 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.76■□□□□ 0.59
GCM1Q9NP62 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
GCM1Q9NP62 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GCM1Q9NP62 MIR4767-201ENST00000582827 78 ntBASIC18.76■□□□□ 0.59
GCM1Q9NP62 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.76■□□□□ 0.59
GCM1Q9NP62 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
GCM1Q9NP62 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 MIR638-201ENST00000385237 100 ntBASIC18.75■□□□□ 0.59
GCM1Q9NP62 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.75■□□□□ 0.59
GCM1Q9NP62 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.75■□□□□ 0.59
GCM1Q9NP62 DUSP8P3-201ENST00000399571 1760 ntBASIC18.75■□□□□ 0.59
GCM1Q9NP62 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GCM1Q9NP62 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
GCM1Q9NP62 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GCM1Q9NP62 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GCM1Q9NP62 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.73■□□□□ 0.59
GCM1Q9NP62 EDA-201ENST00000338901 1233 ntBASIC18.73■□□□□ 0.59
GCM1Q9NP62 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.73■□□□□ 0.59
GCM1Q9NP62 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.73■□□□□ 0.59
GCM1Q9NP62 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.73■□□□□ 0.59
GCM1Q9NP62 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.73■□□□□ 0.59
GCM1Q9NP62 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GCM1Q9NP62 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GCM1Q9NP62 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GCM1Q9NP62 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms